Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AL645922.1-202ENST00000477310 3377 ntTSL 5 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 SCMH1-208ENST00000397171 3186 ntTSL 5 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 NME1-201ENST00000013034 796 ntTSL 3 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AURKC-202ENST00000415300 978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 SUMO2P8-201ENST00000434672 286 ntBASIC8.22□□□□□ -1.09
SVIPQ8NHG7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 MTATP6P25-201ENST00000574491 261 ntBASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AC134407.1-201ENST00000577385 709 ntTSL 3 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AURKC-207ENST00000599062 921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AC079791.1-201ENST00000605356 973 ntBASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 WASH5P-204ENST00000632292 975 ntBASIC8.22□□□□□ -1.09
SVIPQ8NHG7 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 RFLNB-201ENST00000329099 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AC098850.4-201ENST00000448331 8802 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 CNBD2-205ENST00000538900 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 ACOXL-AS1-201ENST00000376593 3026 ntTSL 2 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 EFL1-201ENST00000268206 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 ZAN-206ENST00000618565 8651 ntAPPRIS P4 TSL 5 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 MYO7A-211ENST00000620575 4016 ntTSL 5 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 OPRM1-208ENST00000434900 2033 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AL022313.4-201ENST00000562756 2046 ntBASIC8.22□□□□□ -1.09
SVIPQ8NHG7 MEMO1-201ENST00000295065 4505 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 CORO2B-203ENST00000543950 3611 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 SLC24A4-205ENST00000532405 9950 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 BCL2L13-213ENST00000538149 4797 ntTSL 2 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 ZSCAN25-204ENST00000394152 4349 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 CLDN2-201ENST00000336803 2959 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 AC018665.1-201ENST00000622927 1362 ntBASIC8.22□□□□□ -1.09
SVIPQ8NHG7 DDX4-201ENST00000353507 2778 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 SMG6-202ENST00000354901 3473 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SVIPQ8NHG7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 GAD1-217ENST00000625689 3700 ntTSL 5 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 AL596202.1-201ENST00000435295 3088 ntTSL 2 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 RNF43-207ENST00000583753 3560 ntTSL 2 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 STX3-207ENST00000633708 3111 ntTSL 5 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 OLFML3-202ENST00000369551 1934 ntTSL 2 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 IL1RN-204ENST00000409052 1903 ntTSL 5 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 PCDHGB4-201ENST00000519479 4578 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 SETMAR-201ENST00000358065 2443 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 MRAS-210ENST00000614350 4377 ntTSL 2 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 FLI1-202ENST00000344954 3427 ntTSL 2 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 ARMC2-202ENST00000368972 3663 ntTSL 2 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 SSX6-202ENST00000412590 1461 ntTSL 2 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 CLASP2-202ENST00000333778 1989 ntTSL 2 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 AC008985.1-201ENST00000624169 2239 ntBASIC8.21□□□□□ -1.09
SVIPQ8NHG7 CCDC174-206ENST00000611584 2720 ntTSL 5 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 ITIH5-202ENST00000397146 6721 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SVIPQ8NHG7 CYB5R4-202ENST00000369681 9252 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 FAM86B2-201ENST00000262365 1268 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 AL032822.1-201ENST00000405827 1063 ntBASIC8.21□□□□□ -1.1
SVIPQ8NHG7 HTR3D-203ENST00000428798 1215 ntTSL 5 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 BX664615.1-201ENST00000443558 458 ntBASIC8.21□□□□□ -1.1
SVIPQ8NHG7 YWHABP1-201ENST00000445359 727 ntBASIC8.21□□□□□ -1.1
SVIPQ8NHG7 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 NPM1P8-201ENST00000458237 837 ntBASIC8.21□□□□□ -1.1
SVIPQ8NHG7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 SERPINA9-208ENST00000546329 1156 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SVIPQ8NHG7 AC073863.1-201ENST00000550206 570 ntTSL 4 BASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms