Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NDUFV2P1-201ENST00000596415 907 ntBASIC12.2□□□□□ -0.46
HIST1H3AP68431 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 TBC1D27-202ENST00000424239 1573 ntBASIC12.2□□□□□ -0.46
HIST1H3AP68431 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 KRT8P18-201ENST00000413425 1445 ntBASIC12.2□□□□□ -0.46
HIST1H3AP68431 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HIST1H3AP68431 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.2□□□□□ -0.46
HIST1H3AP68431 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 LINC00638-201ENST00000555578 2518 ntBASIC12.19□□□□□ -0.46
HIST1H3AP68431 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 AC245140.2-201ENST00000624054 1939 ntBASIC12.19□□□□□ -0.46
HIST1H3AP68431 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 AC099521.3-201ENST00000624251 2938 ntBASIC12.19□□□□□ -0.46
HIST1H3AP68431 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 AC006335.1-201ENST00000445200 547 ntBASIC12.19□□□□□ -0.46
HIST1H3AP68431 AC073150.1-201ENST00000450406 1084 ntBASIC12.19□□□□□ -0.46
HIST1H3AP68431 SPTLC1P5-201ENST00000450718 252 ntBASIC12.19□□□□□ -0.46
HIST1H3AP68431 RN7SL258P-201ENST00000478664 300 ntBASIC12.19□□□□□ -0.46
HIST1H3AP68431 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 AL161670.2-201ENST00000557650 1227 ntBASIC12.19□□□□□ -0.46
HIST1H3AP68431 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 AC091544.8-201ENST00000619490 361 ntBASIC12.19□□□□□ -0.46
HIST1H3AP68431 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 AC004241.5-201ENST00000623870 2448 ntBASIC12.19□□□□□ -0.46
HIST1H3AP68431 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.19□□□□□ -0.46
HIST1H3AP68431 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
HIST1H3AP68431 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.18□□□□□ -0.46
HIST1H3AP68431 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HIST1H3AP68431 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms