Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.35□□□□□ -0.43
CCR9P51686 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.35□□□□□ -0.43
CCR9P51686 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.35□□□□□ -0.43
CCR9P51686 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.35□□□□□ -0.43
CCR9P51686 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCR9P51686 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CCR9P51686 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCR9P51686 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CCR9P51686 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCR9P51686 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCR9P51686 LINC01815-202ENST00000641468 1409 ntBASIC12.35□□□□□ -0.43
CCR9P51686 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.35□□□□□ -0.43
CCR9P51686 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCR9P51686 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCR9P51686 AP002353.1-201ENST00000528257 1599 ntBASIC12.35□□□□□ -0.43
CCR9P51686 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.34□□□□□ -0.43
CCR9P51686 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.34□□□□□ -0.43
CCR9P51686 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 Z98885.3-201ENST00000624882 1757 ntBASIC12.34□□□□□ -0.43
CCR9P51686 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.34□□□□□ -0.43
CCR9P51686 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.34□□□□□ -0.43
CCR9P51686 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.34□□□□□ -0.43
CCR9P51686 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.34□□□□□ -0.43
CCR9P51686 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CCR9P51686 HLA-V-201ENST00000429037 534 ntBASIC12.34□□□□□ -0.43
CCR9P51686 XBP1P1-201ENST00000436573 652 ntBASIC12.34□□□□□ -0.43
CCR9P51686 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.34□□□□□ -0.43
CCR9P51686 RPL7P3-201ENST00000441388 714 ntBASIC12.34□□□□□ -0.43
CCR9P51686 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.34□□□□□ -0.43
CCR9P51686 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.34□□□□□ -0.43
CCR9P51686 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.34□□□□□ -0.43
CCR9P51686 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.34□□□□□ -0.43
CCR9P51686 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.34□□□□□ -0.43
CCR9P51686 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.34□□□□□ -0.43
CCR9P51686 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.34□□□□□ -0.43
CCR9P51686 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.34□□□□□ -0.43
CCR9P51686 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.34□□□□□ -0.43
CCR9P51686 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CCR9P51686 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CCR9P51686 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 FP325330.2-201ENST00000624219 5630 ntBASIC12.34□□□□□ -0.43
CCR9P51686 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CCR9P51686 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CCR9P51686 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
CCR9P51686 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.34□□□□□ -0.43
CCR9P51686 AC027369.3-201ENST00000530465 3707 ntBASIC12.34□□□□□ -0.43
CCR9P51686 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCR9P51686 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
CCR9P51686 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
CCR9P51686 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
CCR9P51686 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
CCR9P51686 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 AC102953.2-201ENST00000609755 3026 ntBASIC12.33□□□□□ -0.44
CCR9P51686 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.33□□□□□ -0.44
CCR9P51686 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.33□□□□□ -0.44
CCR9P51686 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.33□□□□□ -0.44
CCR9P51686 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.33□□□□□ -0.44
CCR9P51686 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.33□□□□□ -0.44
CCR9P51686 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.33□□□□□ -0.44
CCR9P51686 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.33□□□□□ -0.44
CCR9P51686 AL354877.1-201ENST00000424412 413 ntBASIC12.33□□□□□ -0.44
CCR9P51686 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.33□□□□□ -0.44
CCR9P51686 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
CCR9P51686 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.33□□□□□ -0.44
CCR9P51686 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.33□□□□□ -0.44
CCR9P51686 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.33□□□□□ -0.44
CCR9P51686 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.33□□□□□ -0.44
CCR9P51686 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.33□□□□□ -0.44
CCR9P51686 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.33□□□□□ -0.44
CCR9P51686 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.33□□□□□ -0.44
CCR9P51686 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.33□□□□□ -0.44
CCR9P51686 AP000346.4-201ENST00000614827 381 ntBASIC12.33□□□□□ -0.44
CCR9P51686 AC008687.7-202ENST00000637404 953 ntBASIC12.33□□□□□ -0.44
CCR9P51686 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CCR9P51686 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms