Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 FAM90A16P-201ENST00000526662 1395 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 FAM90A9P-201ENST00000527940 1395 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 FAM90A5P-201ENST00000528738 1395 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 FAM90A14P-201ENST00000530386 1395 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 FAM90A13P-201ENST00000534703 1395 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.74□□□□□ -0.05
BRCC3P46736 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.74□□□□□ -0.05
BRCC3P46736 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.74□□□□□ -0.05
BRCC3P46736 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
BRCC3P46736 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
BRCC3P46736 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC14.74□□□□□ -0.05
BRCC3P46736 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC14.74□□□□□ -0.05
BRCC3P46736 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 FAM21EP-201ENST00000417804 985 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 PSAT1P2-201ENST00000426107 972 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC14.74□□□□□ -0.05
BRCC3P46736 PSMD4P1-201ENST00000433951 1109 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC14.74□□□□□ -0.05
BRCC3P46736 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC14.74□□□□□ -0.05
BRCC3P46736 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 PFN2-212ENST00000490975 858 ntTSL 4 BASIC14.74□□□□□ -0.05
BRCC3P46736 HNRNPA1P56-201ENST00000505767 954 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.74□□□□□ -0.05
BRCC3P46736 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC14.74□□□□□ -0.05
BRCC3P46736 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC14.74□□□□□ -0.05
BRCC3P46736 BAK1P2-201ENST00000532665 631 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC14.74□□□□□ -0.05
BRCC3P46736 AL359219.1-201ENST00000556311 934 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 AC141586.1-203ENST00000567242 366 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 AP005264.6-204ENST00000588436 719 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC14.74□□□□□ -0.05
BRCC3P46736 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC14.74□□□□□ -0.05
BRCC3P46736 MIR6756-201ENST00000616240 63 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC14.74□□□□□ -0.05
BRCC3P46736 FO393412.1-201ENST00000619841 382 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 MIR6746-201ENST00000620971 63 ntBASIC14.74□□□□□ -0.05
BRCC3P46736 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
BRCC3P46736 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.74□□□□□ -0.05
BRCC3P46736 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.74□□□□□ -0.05
BRCC3P46736 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.74□□□□□ -0.05
BRCC3P46736 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BRCC3P46736 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.74□□□□□ -0.05
BRCC3P46736 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.74□□□□□ -0.05
BRCC3P46736 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.74□□□□□ -0.05
BRCC3P46736 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
BRCC3P46736 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.74□□□□□ -0.05
BRCC3P46736 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
BRCC3P46736 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
BRCC3P46736 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.73□□□□□ -0.05
BRCC3P46736 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.73□□□□□ -0.05
BRCC3P46736 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
BRCC3P46736 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.73□□□□□ -0.05
BRCC3P46736 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.73□□□□□ -0.05
BRCC3P46736 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.73□□□□□ -0.05
BRCC3P46736 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.73□□□□□ -0.05
BRCC3P46736 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 RHOC-205ENST00000369636 786 ntTSL 2 BASIC14.73□□□□□ -0.05
BRCC3P46736 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
BRCC3P46736 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 GALP-202ENST00000440823 889 ntTSL 5 BASIC14.73□□□□□ -0.05
BRCC3P46736 AL135901.1-201ENST00000451812 333 ntBASIC14.73□□□□□ -0.05
BRCC3P46736 RN7SL351P-201ENST00000469306 248 ntBASIC14.73□□□□□ -0.05
BRCC3P46736 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC14.73□□□□□ -0.05
BRCC3P46736 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC14.73□□□□□ -0.05
BRCC3P46736 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
BRCC3P46736 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
BRCC3P46736 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC14.73□□□□□ -0.05
BRCC3P46736 AC006483.2-201ENST00000609813 515 ntBASIC14.73□□□□□ -0.05
BRCC3P46736 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC14.73□□□□□ -0.05
BRCC3P46736 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
BRCC3P46736 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 RCC2P5-201ENST00000492126 1487 ntBASIC14.73□□□□□ -0.05
BRCC3P46736 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC14.73□□□□□ -0.05
BRCC3P46736 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BRCC3P46736 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms