Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
VARSP26640 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.88□□□□□ -0.19
VARSP26640 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC13.88□□□□□ -0.19
VARSP26640 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VARSP26640 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VARSP26640 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
VARSP26640 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.88□□□□□ -0.19
VARSP26640 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
VARSP26640 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VARSP26640 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.87□□□□□ -0.19
VARSP26640 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC13.87□□□□□ -0.19
VARSP26640 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
VARSP26640 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.87□□□□□ -0.19
VARSP26640 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.87□□□□□ -0.19
VARSP26640 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
VARSP26640 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VARSP26640 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.87□□□□□ -0.19
VARSP26640 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.87□□□□□ -0.19
VARSP26640 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.87□□□□□ -0.19
VARSP26640 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.87□□□□□ -0.19
VARSP26640 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.87□□□□□ -0.19
VARSP26640 AC106794.1-201ENST00000506935 792 ntBASIC13.87□□□□□ -0.19
VARSP26640 AC005740.2-201ENST00000511085 419 ntBASIC13.87□□□□□ -0.19
VARSP26640 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.87□□□□□ -0.19
VARSP26640 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.87□□□□□ -0.19
VARSP26640 TMF1P1-201ENST00000576058 373 ntBASIC13.87□□□□□ -0.19
VARSP26640 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.87□□□□□ -0.19
VARSP26640 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.87□□□□□ -0.19
VARSP26640 AC009948.4-201ENST00000604692 675 ntBASIC13.87□□□□□ -0.19
VARSP26640 AC092953.2-201ENST00000608000 699 ntBASIC13.87□□□□□ -0.19
VARSP26640 BAP1-211ENST00000615113 489 ntBASIC13.87□□□□□ -0.19
VARSP26640 AP001505.2-201ENST00000616815 443 ntBASIC13.87□□□□□ -0.19
VARSP26640 AC004923.1-202ENST00000642106 209 ntBASIC13.87□□□□□ -0.19
VARSP26640 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
VARSP26640 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
VARSP26640 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.87□□□□□ -0.19
VARSP26640 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VARSP26640 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
VARSP26640 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.87□□□□□ -0.19
VARSP26640 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VARSP26640 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.87□□□□□ -0.19
VARSP26640 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VARSP26640 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VARSP26640 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 AL031595.1-201ENST00000623969 4709 ntBASIC13.86□□□□□ -0.19
VARSP26640 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.86□□□□□ -0.19
VARSP26640 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.86□□□□□ -0.19
VARSP26640 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
VARSP26640 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
VARSP26640 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
VARSP26640 CCT8L1P-201ENST00000465400 1674 ntBASIC13.86□□□□□ -0.19
VARSP26640 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 NCLP1-201ENST00000445357 1963 ntBASIC13.86□□□□□ -0.19
VARSP26640 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VARSP26640 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms