Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.95□□□□□ -0.34
COL5A1P20908 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
COL5A1P20908 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
COL5A1P20908 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.95□□□□□ -0.34
COL5A1P20908 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL5A1P20908 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.95□□□□□ -0.34
COL5A1P20908 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL5A1P20908 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL5A1P20908 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL5A1P20908 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC12.95□□□□□ -0.34
COL5A1P20908 DLX4-206ENST00000611342 1662 ntBASIC12.95□□□□□ -0.34
COL5A1P20908 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL5A1P20908 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
COL5A1P20908 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL5A1P20908 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL5A1P20908 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL5A1P20908 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL5A1P20908 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL5A1P20908 NOS2P3-201ENST00000411468 867 ntBASIC12.95□□□□□ -0.34
COL5A1P20908 CRIP1P2-201ENST00000425396 228 ntBASIC12.95□□□□□ -0.34
COL5A1P20908 NOS2P2-201ENST00000426269 867 ntBASIC12.95□□□□□ -0.34
COL5A1P20908 AL954722.1-201ENST00000431238 259 ntBASIC12.95□□□□□ -0.34
COL5A1P20908 RPL3P9-201ENST00000463217 1183 ntBASIC12.95□□□□□ -0.34
COL5A1P20908 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.95□□□□□ -0.34
COL5A1P20908 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC12.95□□□□□ -0.34
COL5A1P20908 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC12.95□□□□□ -0.34
COL5A1P20908 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL5A1P20908 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC12.95□□□□□ -0.34
COL5A1P20908 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC12.95□□□□□ -0.34
COL5A1P20908 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.95□□□□□ -0.34
COL5A1P20908 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.94□□□□□ -0.34
COL5A1P20908 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.94□□□□□ -0.34
COL5A1P20908 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
COL5A1P20908 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.94□□□□□ -0.34
COL5A1P20908 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.94□□□□□ -0.34
COL5A1P20908 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
COL5A1P20908 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
COL5A1P20908 CA6-205ENST00000480186 1493 ntTSL 2 BASIC12.94□□□□□ -0.34
COL5A1P20908 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.94□□□□□ -0.34
COL5A1P20908 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.94□□□□□ -0.34
COL5A1P20908 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
COL5A1P20908 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
COL5A1P20908 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
COL5A1P20908 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.94□□□□□ -0.34
COL5A1P20908 IQCF4-203ENST00000428561 420 ntBASIC12.94□□□□□ -0.34
COL5A1P20908 AC093106.1-201ENST00000437271 352 ntBASIC12.94□□□□□ -0.34
COL5A1P20908 ACTG1P23-201ENST00000437653 1074 ntBASIC12.94□□□□□ -0.34
COL5A1P20908 OR4C14P-201ENST00000440929 923 ntBASIC12.94□□□□□ -0.34
COL5A1P20908 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC12.94□□□□□ -0.34
COL5A1P20908 AL161727.1-201ENST00000457409 530 ntBASIC12.94□□□□□ -0.34
COL5A1P20908 BICD1P1-201ENST00000457832 1222 ntBASIC12.94□□□□□ -0.34
COL5A1P20908 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC12.94□□□□□ -0.34
COL5A1P20908 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
COL5A1P20908 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
COL5A1P20908 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC12.94□□□□□ -0.34
COL5A1P20908 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC12.94□□□□□ -0.34
COL5A1P20908 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC12.94□□□□□ -0.34
COL5A1P20908 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC12.94□□□□□ -0.34
COL5A1P20908 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
COL5A1P20908 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
COL5A1P20908 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.94□□□□□ -0.34
COL5A1P20908 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL5A1P20908 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
COL5A1P20908 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
COL5A1P20908 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.93□□□□□ -0.34
COL5A1P20908 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
COL5A1P20908 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL5A1P20908 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL5A1P20908 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.93□□□□□ -0.34
COL5A1P20908 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL5A1P20908 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
COL5A1P20908 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL5A1P20908 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
COL5A1P20908 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COL5A1P20908 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
COL5A1P20908 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL5A1P20908 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL5A1P20908 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC12.93□□□□□ -0.34
COL5A1P20908 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC12.93□□□□□ -0.34
COL5A1P20908 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
COL5A1P20908 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms