Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC3P19447 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ERCC3P19447 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
ERCC3P19447 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.18■□□□□ 0.18
ERCC3P19447 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.18■□□□□ 0.18
ERCC3P19447 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.18■□□□□ 0.18
ERCC3P19447 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.18■□□□□ 0.18
ERCC3P19447 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.18■□□□□ 0.18
ERCC3P19447 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.18■□□□□ 0.18
ERCC3P19447 VENTXP3-201ENST00000546480 773 ntBASIC16.18■□□□□ 0.18
ERCC3P19447 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.18■□□□□ 0.18
ERCC3P19447 AC055811.3-201ENST00000584952 686 ntBASIC16.18■□□□□ 0.18
ERCC3P19447 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC16.18■□□□□ 0.18
ERCC3P19447 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.18■□□□□ 0.18
ERCC3P19447 AC010976.2-201ENST00000609697 852 ntBASIC16.18■□□□□ 0.18
ERCC3P19447 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ERCC3P19447 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.18■□□□□ 0.18
ERCC3P19447 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC3P19447 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC16.18■□□□□ 0.18
ERCC3P19447 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC16.18■□□□□ 0.18
ERCC3P19447 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.18■□□□□ 0.18
ERCC3P19447 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC3P19447 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
ERCC3P19447 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC3P19447 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC3P19447 AC107918.4-201ENST00000641966 3141 ntBASIC16.18■□□□□ 0.18
ERCC3P19447 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ERCC3P19447 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ERCC3P19447 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC3P19447 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC3P19447 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC3P19447 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ERCC3P19447 AL672207.1-201ENST00000328462 1570 ntBASIC16.17■□□□□ 0.18
ERCC3P19447 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC16.17■□□□□ 0.18
ERCC3P19447 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
ERCC3P19447 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.17■□□□□ 0.18
ERCC3P19447 KRT17P4-201ENST00000429445 819 ntBASIC16.17■□□□□ 0.18
ERCC3P19447 AC092573.1-201ENST00000433054 884 ntBASIC16.17■□□□□ 0.18
ERCC3P19447 AL135901.1-201ENST00000451812 333 ntBASIC16.17■□□□□ 0.18
ERCC3P19447 RN7SL494P-201ENST00000461517 304 ntBASIC16.17■□□□□ 0.18
ERCC3P19447 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.17■□□□□ 0.18
ERCC3P19447 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.17■□□□□ 0.18
ERCC3P19447 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.17■□□□□ 0.18
ERCC3P19447 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.17■□□□□ 0.18
ERCC3P19447 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 RN7SL832P-201ENST00000607781 1756 ntBASIC16.17■□□□□ 0.18
ERCC3P19447 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
ERCC3P19447 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ERCC3P19447 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC16.17■□□□□ 0.18
ERCC3P19447 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
ERCC3P19447 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.17■□□□□ 0.18
ERCC3P19447 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.17■□□□□ 0.18
ERCC3P19447 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.17■□□□□ 0.18
ERCC3P19447 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ERCC3P19447 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ERCC3P19447 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
ERCC3P19447 KRT8P43-201ENST00000406052 1458 ntBASIC16.16■□□□□ 0.18
ERCC3P19447 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 FUCA1P1-201ENST00000374476 1351 ntBASIC16.16■□□□□ 0.18
ERCC3P19447 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC16.16■□□□□ 0.18
ERCC3P19447 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
ERCC3P19447 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.16■□□□□ 0.18
ERCC3P19447 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ERCC3P19447 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ERCC3P19447 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.16■□□□□ 0.18
ERCC3P19447 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 AC103592.1-201ENST00000394513 664 ntBASIC16.16■□□□□ 0.18
ERCC3P19447 AC234644.1-201ENST00000406065 370 ntBASIC16.16■□□□□ 0.18
ERCC3P19447 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.16■□□□□ 0.18
ERCC3P19447 AC006529.1-201ENST00000459978 637 ntBASIC16.16■□□□□ 0.18
ERCC3P19447 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ERCC3P19447 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms