Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 U73169.1-201ENST00000395152 367 ntBASIC14.57□□□□□ -0.08
RB1P06400 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC14.57□□□□□ -0.08
RB1P06400 FDPSP7-201ENST00000429043 1054 ntBASIC14.57□□□□□ -0.08
RB1P06400 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC14.57□□□□□ -0.08
RB1P06400 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC14.57□□□□□ -0.08
RB1P06400 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC14.57□□□□□ -0.08
RB1P06400 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC14.57□□□□□ -0.08
RB1P06400 MIR5091-201ENST00000578707 93 ntBASIC14.57□□□□□ -0.08
RB1P06400 MIR3940-201ENST00000579148 102 ntBASIC14.57□□□□□ -0.08
RB1P06400 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC14.57□□□□□ -0.08
RB1P06400 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RB1P06400 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RB1P06400 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RB1P06400 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RB1P06400 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
RB1P06400 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.57□□□□□ -0.08
RB1P06400 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
RB1P06400 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
RB1P06400 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 AC113367.3-201ENST00000508316 1912 ntBASIC14.56□□□□□ -0.08
RB1P06400 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RB1P06400 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 PTN-202ENST00000393083 1599 ntTSL 5 BASIC14.56□□□□□ -0.08
RB1P06400 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.56□□□□□ -0.08
RB1P06400 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.56□□□□□ -0.08
RB1P06400 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RB1P06400 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC14.56□□□□□ -0.08
RB1P06400 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.56□□□□□ -0.08
RB1P06400 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC14.56□□□□□ -0.08
RB1P06400 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
RB1P06400 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RB1P06400 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC14.56□□□□□ -0.08
RB1P06400 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC14.56□□□□□ -0.08
RB1P06400 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
RB1P06400 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC14.56□□□□□ -0.08
RB1P06400 RHOQP2-201ENST00000449922 579 ntBASIC14.56□□□□□ -0.08
RB1P06400 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 PSME2P2-201ENST00000453033 700 ntBASIC14.56□□□□□ -0.08
RB1P06400 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC14.56□□□□□ -0.08
RB1P06400 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC14.56□□□□□ -0.08
RB1P06400 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC14.56□□□□□ -0.08
RB1P06400 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC14.56□□□□□ -0.08
RB1P06400 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.56□□□□□ -0.08
RB1P06400 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.56□□□□□ -0.08
RB1P06400 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
RB1P06400 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC14.56□□□□□ -0.08
RB1P06400 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC14.56□□□□□ -0.08
RB1P06400 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC14.56□□□□□ -0.08
RB1P06400 AC061965.1-201ENST00000560524 1465 ntBASIC14.56□□□□□ -0.08
RB1P06400 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 CICP24-201ENST00000605464 2705 ntBASIC14.56□□□□□ -0.08
RB1P06400 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RB1P06400 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.56□□□□□ -0.08
RB1P06400 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.55□□□□□ -0.08
RB1P06400 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
RB1P06400 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
RB1P06400 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RB1P06400 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.55□□□□□ -0.08
RB1P06400 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RB1P06400 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms