Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
APOC1P02654 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC1P02654 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC1P02654 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
APOC1P02654 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
APOC1P02654 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.45□□□□□ -0.42
APOC1P02654 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 MIR1909-201ENST00000411312 80 ntBASIC12.45□□□□□ -0.42
APOC1P02654 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC1P02654 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.45□□□□□ -0.42
APOC1P02654 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.45□□□□□ -0.42
APOC1P02654 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC1P02654 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
APOC1P02654 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
APOC1P02654 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.45□□□□□ -0.42
APOC1P02654 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC1P02654 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.45□□□□□ -0.42
APOC1P02654 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC1P02654 MIR4783-201ENST00000580343 82 ntBASIC12.45□□□□□ -0.42
APOC1P02654 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC1P02654 AC005324.6-201ENST00000587972 613 ntBASIC12.45□□□□□ -0.42
APOC1P02654 AC008805.1-201ENST00000590892 364 ntBASIC12.45□□□□□ -0.42
APOC1P02654 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC1P02654 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.45□□□□□ -0.42
APOC1P02654 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
APOC1P02654 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC1P02654 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
APOC1P02654 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC1P02654 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC1P02654 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
APOC1P02654 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC1P02654 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC1P02654 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.45□□□□□ -0.42
APOC1P02654 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.45□□□□□ -0.42
APOC1P02654 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
APOC1P02654 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
APOC1P02654 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.44□□□□□ -0.42
APOC1P02654 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.44□□□□□ -0.42
APOC1P02654 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.44□□□□□ -0.42
APOC1P02654 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
APOC1P02654 PCDHB17P-202ENST00000623466 3066 ntBASIC12.44□□□□□ -0.42
APOC1P02654 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
APOC1P02654 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
APOC1P02654 CYP4F23P-201ENST00000593402 1579 ntBASIC12.44□□□□□ -0.42
APOC1P02654 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.44□□□□□ -0.42
APOC1P02654 AL365181.3-201ENST00000605886 3222 ntBASIC12.44□□□□□ -0.42
APOC1P02654 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.44□□□□□ -0.42
APOC1P02654 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC1P02654 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
APOC1P02654 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
APOC1P02654 KRT18P36-201ENST00000411618 1276 ntBASIC12.44□□□□□ -0.42
APOC1P02654 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.44□□□□□ -0.42
APOC1P02654 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.44□□□□□ -0.42
APOC1P02654 HSPB1P2-201ENST00000448722 546 ntBASIC12.44□□□□□ -0.42
APOC1P02654 RNA5SP412-201ENST00000516234 123 ntBASIC12.44□□□□□ -0.42
APOC1P02654 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.44□□□□□ -0.42
APOC1P02654 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC1P02654 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.44□□□□□ -0.42
APOC1P02654 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.44□□□□□ -0.42
APOC1P02654 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.44□□□□□ -0.42
APOC1P02654 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.44□□□□□ -0.42
APOC1P02654 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 MARK2P9-201ENST00000430958 1727 ntBASIC12.44□□□□□ -0.42
APOC1P02654 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC1P02654 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 FAM90A12P-201ENST00000519497 2375 ntBASIC12.44□□□□□ -0.42
APOC1P02654 FAM90A24P-201ENST00000520792 2369 ntBASIC12.44□□□□□ -0.42
APOC1P02654 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.44□□□□□ -0.42
APOC1P02654 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
APOC1P02654 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.44□□□□□ -0.42
APOC1P02654 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms