Protein–RNA interactions for Protein: Q9Y5F6

PCDHGC5, Protocadherin gamma-C5, humanhuman

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC5Q9Y5F6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC5Q9Y5F6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC5Q9Y5F6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC5Q9Y5F6 MIR6821-201ENST00000617625 74 ntBASIC24.61■■□□□ 1.53
PCDHGC5Q9Y5F6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC5Q9Y5F6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
PCDHGC5Q9Y5F6 SYT6-210ENST00000641643 1587 ntBASIC24.61■■□□□ 1.53
PCDHGC5Q9Y5F6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC5Q9Y5F6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHGC5Q9Y5F6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC5Q9Y5F6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC5Q9Y5F6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHGC5Q9Y5F6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGC5Q9Y5F6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGC5Q9Y5F6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGC5Q9Y5F6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGC5Q9Y5F6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGC5Q9Y5F6 SERBP1P1-201ENST00000396021 1160 ntBASIC24.6■■□□□ 1.53
PCDHGC5Q9Y5F6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDHGC5Q9Y5F6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGC5Q9Y5F6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDHGC5Q9Y5F6 AC091305.1-201ENST00000479476 895 ntBASIC24.6■■□□□ 1.53
PCDHGC5Q9Y5F6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHGC5Q9Y5F6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
PCDHGC5Q9Y5F6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHGC5Q9Y5F6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGC5Q9Y5F6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGC5Q9Y5F6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHGC5Q9Y5F6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGC5Q9Y5F6 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.59■■□□□ 1.53
PCDHGC5Q9Y5F6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGC5Q9Y5F6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGC5Q9Y5F6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHGC5Q9Y5F6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGC5Q9Y5F6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGC5Q9Y5F6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.58■■□□□ 1.53
PCDHGC5Q9Y5F6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.58■■□□□ 1.53
PCDHGC5Q9Y5F6 CA15P2-201ENST00000611168 834 ntBASIC24.58■■□□□ 1.53
PCDHGC5Q9Y5F6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
PCDHGC5Q9Y5F6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDHGC5Q9Y5F6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDHGC5Q9Y5F6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.57■■□□□ 1.52
PCDHGC5Q9Y5F6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGC5Q9Y5F6 AC097381.1-201ENST00000429019 1296 ntBASIC24.57■■□□□ 1.52
PCDHGC5Q9Y5F6 AL162430.1-201ENST00000480705 870 ntBASIC24.57■■□□□ 1.52
PCDHGC5Q9Y5F6 DUX4L19-201ENST00000557448 1267 ntBASIC24.57■■□□□ 1.52
PCDHGC5Q9Y5F6 AC099791.2-201ENST00000605725 427 ntBASIC24.57■■□□□ 1.52
PCDHGC5Q9Y5F6 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDHGC5Q9Y5F6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDHGC5Q9Y5F6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGC5Q9Y5F6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGC5Q9Y5F6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDHGC5Q9Y5F6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
PCDHGC5Q9Y5F6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.56■■□□□ 1.52
PCDHGC5Q9Y5F6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGC5Q9Y5F6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGC5Q9Y5F6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
PCDHGC5Q9Y5F6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGC5Q9Y5F6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDHGC5Q9Y5F6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGC5Q9Y5F6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGC5Q9Y5F6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHGC5Q9Y5F6 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.55■■□□□ 1.52
PCDHGC5Q9Y5F6 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.55■■□□□ 1.52
PCDHGC5Q9Y5F6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGC5Q9Y5F6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGC5Q9Y5F6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.55■■□□□ 1.52
PCDHGC5Q9Y5F6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHGC5Q9Y5F6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGC5Q9Y5F6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.55■■□□□ 1.52
PCDHGC5Q9Y5F6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
PCDHGC5Q9Y5F6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHGC5Q9Y5F6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.55■■□□□ 1.52
PCDHGC5Q9Y5F6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 AC131274.2-201ENST00000580697 1507 ntBASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
PCDHGC5Q9Y5F6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
PCDHGC5Q9Y5F6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGC5Q9Y5F6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGC5Q9Y5F6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGC5Q9Y5F6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.53■■□□□ 1.52
PCDHGC5Q9Y5F6 AC008764.7-201ENST00000593779 1081 ntBASIC24.53■■□□□ 1.52
PCDHGC5Q9Y5F6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGC5Q9Y5F6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
PCDHGC5Q9Y5F6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms