Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LSM5Q9Y4Y9 AL161729.1-201ENST00000604104 1402 ntBASIC18.41■□□□□ 0.54
LSM5Q9Y4Y9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.41■□□□□ 0.54
LSM5Q9Y4Y9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSM5Q9Y4Y9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.41■□□□□ 0.54
LSM5Q9Y4Y9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSM5Q9Y4Y9 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.41■□□□□ 0.54
LSM5Q9Y4Y9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.41■□□□□ 0.54
LSM5Q9Y4Y9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSM5Q9Y4Y9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LSM5Q9Y4Y9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSM5Q9Y4Y9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LSM5Q9Y4Y9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
LSM5Q9Y4Y9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM5Q9Y4Y9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.4■□□□□ 0.54
LSM5Q9Y4Y9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM5Q9Y4Y9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.4■□□□□ 0.54
LSM5Q9Y4Y9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.4■□□□□ 0.54
LSM5Q9Y4Y9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM5Q9Y4Y9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.4■□□□□ 0.54
LSM5Q9Y4Y9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM5Q9Y4Y9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LSM5Q9Y4Y9 CR559946.2-201ENST00000623684 991 ntBASIC18.4■□□□□ 0.54
LSM5Q9Y4Y9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.4■□□□□ 0.54
LSM5Q9Y4Y9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM5Q9Y4Y9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM5Q9Y4Y9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM5Q9Y4Y9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM5Q9Y4Y9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LSM5Q9Y4Y9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
LSM5Q9Y4Y9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LSM5Q9Y4Y9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LSM5Q9Y4Y9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.39■□□□□ 0.53
LSM5Q9Y4Y9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LSM5Q9Y4Y9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LSM5Q9Y4Y9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LSM5Q9Y4Y9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM5Q9Y4Y9 KRT18P10-201ENST00000388836 1287 ntBASIC18.39■□□□□ 0.53
LSM5Q9Y4Y9 RP9P-202ENST00000450133 1212 ntBASIC18.39■□□□□ 0.53
LSM5Q9Y4Y9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
LSM5Q9Y4Y9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM5Q9Y4Y9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LSM5Q9Y4Y9 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.39■□□□□ 0.53
LSM5Q9Y4Y9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LSM5Q9Y4Y9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.39■□□□□ 0.53
LSM5Q9Y4Y9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.39■□□□□ 0.53
LSM5Q9Y4Y9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.38■□□□□ 0.53
LSM5Q9Y4Y9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LSM5Q9Y4Y9 SLC25A24-204ENST00000569674 2357 ntBASIC18.38■□□□□ 0.53
LSM5Q9Y4Y9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM5Q9Y4Y9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LSM5Q9Y4Y9 AC093536.1-201ENST00000569153 554 ntBASIC18.38■□□□□ 0.53
LSM5Q9Y4Y9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM5Q9Y4Y9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LSM5Q9Y4Y9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM5Q9Y4Y9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
LSM5Q9Y4Y9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.38■□□□□ 0.53
LSM5Q9Y4Y9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM5Q9Y4Y9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LSM5Q9Y4Y9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM5Q9Y4Y9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LSM5Q9Y4Y9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM5Q9Y4Y9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM5Q9Y4Y9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.37■□□□□ 0.53
LSM5Q9Y4Y9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.37■□□□□ 0.53
LSM5Q9Y4Y9 AC060814.1-201ENST00000554326 538 ntBASIC18.37■□□□□ 0.53
LSM5Q9Y4Y9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM5Q9Y4Y9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM5Q9Y4Y9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM5Q9Y4Y9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM5Q9Y4Y9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM5Q9Y4Y9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LSM5Q9Y4Y9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LSM5Q9Y4Y9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.37■□□□□ 0.53
LSM5Q9Y4Y9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM5Q9Y4Y9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.36■□□□□ 0.53
LSM5Q9Y4Y9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LSM5Q9Y4Y9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSM5Q9Y4Y9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM5Q9Y4Y9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
LSM5Q9Y4Y9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LSM5Q9Y4Y9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LSM5Q9Y4Y9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LSM5Q9Y4Y9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms