Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
RTCBQ9Y3I0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RTCBQ9Y3I0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RTCBQ9Y3I0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
RTCBQ9Y3I0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
RTCBQ9Y3I0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC28.64■■■□□ 2.18
RTCBQ9Y3I0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC28.64■■■□□ 2.18
RTCBQ9Y3I0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RTCBQ9Y3I0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RTCBQ9Y3I0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RTCBQ9Y3I0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RTCBQ9Y3I0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC28.63■■■□□ 2.17
RTCBQ9Y3I0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
RTCBQ9Y3I0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RTCBQ9Y3I0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RTCBQ9Y3I0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RTCBQ9Y3I0 AC091060.1-201ENST00000623524 1766 ntBASIC28.62■■■□□ 2.17
RTCBQ9Y3I0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC28.62■■■□□ 2.17
RTCBQ9Y3I0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
RTCBQ9Y3I0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
RTCBQ9Y3I0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC28.62■■■□□ 2.17
RTCBQ9Y3I0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC28.62■■■□□ 2.17
RTCBQ9Y3I0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC28.62■■■□□ 2.17
RTCBQ9Y3I0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
RTCBQ9Y3I0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
RTCBQ9Y3I0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RTCBQ9Y3I0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
RTCBQ9Y3I0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RTCBQ9Y3I0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC28.61■■■□□ 2.17
RTCBQ9Y3I0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
RTCBQ9Y3I0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC28.61■■■□□ 2.17
RTCBQ9Y3I0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC28.6■■■□□ 2.17
RTCBQ9Y3I0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC28.6■■■□□ 2.17
RTCBQ9Y3I0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
RTCBQ9Y3I0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RTCBQ9Y3I0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
RTCBQ9Y3I0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RTCBQ9Y3I0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
RTCBQ9Y3I0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RTCBQ9Y3I0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RTCBQ9Y3I0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC28.59■■■□□ 2.17
RTCBQ9Y3I0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RTCBQ9Y3I0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC28.59■■■□□ 2.17
RTCBQ9Y3I0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC28.59■■■□□ 2.17
RTCBQ9Y3I0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC28.59■■■□□ 2.17
RTCBQ9Y3I0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC28.59■■■□□ 2.17
RTCBQ9Y3I0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC28.59■■■□□ 2.17
RTCBQ9Y3I0 AC080038.1-201ENST00000611274 1154 ntBASIC28.59■■■□□ 2.17
RTCBQ9Y3I0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
RTCBQ9Y3I0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RTCBQ9Y3I0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RTCBQ9Y3I0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.59■■■□□ 2.17
RTCBQ9Y3I0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC28.59■■■□□ 2.17
RTCBQ9Y3I0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
RTCBQ9Y3I0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC28.58■■■□□ 2.17
RTCBQ9Y3I0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
RTCBQ9Y3I0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
RTCBQ9Y3I0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
RTCBQ9Y3I0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
RTCBQ9Y3I0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
RTCBQ9Y3I0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC28.58■■■□□ 2.17
RTCBQ9Y3I0 AP005435.1-201ENST00000529293 1178 ntBASIC28.58■■■□□ 2.17
RTCBQ9Y3I0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
RTCBQ9Y3I0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
RTCBQ9Y3I0 AC105233.4-201ENST00000642045 216 ntBASIC28.57■■■□□ 2.16
RTCBQ9Y3I0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RTCBQ9Y3I0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RTCBQ9Y3I0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC28.57■■■□□ 2.16
RTCBQ9Y3I0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
RTCBQ9Y3I0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.56■■■□□ 2.16
RTCBQ9Y3I0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RTCBQ9Y3I0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
RTCBQ9Y3I0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RTCBQ9Y3I0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC28.56■■■□□ 2.16
RTCBQ9Y3I0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RTCBQ9Y3I0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC28.56■■■□□ 2.16
RTCBQ9Y3I0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
RTCBQ9Y3I0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC28.56■■■□□ 2.16
RTCBQ9Y3I0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC28.56■■■□□ 2.16
RTCBQ9Y3I0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
RTCBQ9Y3I0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.56■■■□□ 2.16
RTCBQ9Y3I0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC28.56■■■□□ 2.16
RTCBQ9Y3I0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC28.56■■■□□ 2.16
RTCBQ9Y3I0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
RTCBQ9Y3I0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC28.55■■■□□ 2.16
RTCBQ9Y3I0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC28.55■■■□□ 2.16
RTCBQ9Y3I0 AC006015.1-201ENST00000429970 570 ntBASIC28.55■■■□□ 2.16
RTCBQ9Y3I0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC28.55■■■□□ 2.16
RTCBQ9Y3I0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RTCBQ9Y3I0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC28.54■■■□□ 2.16
RTCBQ9Y3I0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
RTCBQ9Y3I0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RTCBQ9Y3I0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RTCBQ9Y3I0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC28.53■■■□□ 2.16
RTCBQ9Y3I0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC28.53■■■□□ 2.16
RTCBQ9Y3I0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC28.53■■■□□ 2.16
RTCBQ9Y3I0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
RTCBQ9Y3I0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC28.53■■■□□ 2.16
RTCBQ9Y3I0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
RTCBQ9Y3I0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC28.53■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms