Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 LINC00565-201ENST00000562710 2331 ntBASIC20.88■□□□□ 0.93
IFT52Q9Y366 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.88■□□□□ 0.93
IFT52Q9Y366 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IFT52Q9Y366 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.88■□□□□ 0.93
IFT52Q9Y366 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
IFT52Q9Y366 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
IFT52Q9Y366 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.87■□□□□ 0.93
IFT52Q9Y366 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
IFT52Q9Y366 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IFT52Q9Y366 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
IFT52Q9Y366 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IFT52Q9Y366 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.87■□□□□ 0.93
IFT52Q9Y366 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
IFT52Q9Y366 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IFT52Q9Y366 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.87■□□□□ 0.93
IFT52Q9Y366 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.87■□□□□ 0.93
IFT52Q9Y366 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.87■□□□□ 0.93
IFT52Q9Y366 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.87■□□□□ 0.93
IFT52Q9Y366 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
IFT52Q9Y366 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IFT52Q9Y366 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IFT52Q9Y366 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
IFT52Q9Y366 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
IFT52Q9Y366 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IFT52Q9Y366 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.86■□□□□ 0.93
IFT52Q9Y366 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
IFT52Q9Y366 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
IFT52Q9Y366 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
IFT52Q9Y366 AC137630.3-201ENST00000607245 391 ntBASIC20.86■□□□□ 0.93
IFT52Q9Y366 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
IFT52Q9Y366 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
IFT52Q9Y366 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.86■□□□□ 0.93
IFT52Q9Y366 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
IFT52Q9Y366 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
IFT52Q9Y366 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.85■□□□□ 0.93
IFT52Q9Y366 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.85■□□□□ 0.93
IFT52Q9Y366 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IFT52Q9Y366 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.85■□□□□ 0.93
IFT52Q9Y366 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.85■□□□□ 0.93
IFT52Q9Y366 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IFT52Q9Y366 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.85■□□□□ 0.93
IFT52Q9Y366 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.85■□□□□ 0.93
IFT52Q9Y366 AL121603.2-201ENST00000557373 2117 ntBASIC20.85■□□□□ 0.93
IFT52Q9Y366 AL031848.2-201ENST00000607670 837 ntBASIC20.85■□□□□ 0.93
IFT52Q9Y366 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IFT52Q9Y366 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IFT52Q9Y366 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IFT52Q9Y366 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IFT52Q9Y366 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
IFT52Q9Y366 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
IFT52Q9Y366 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.85■□□□□ 0.93
IFT52Q9Y366 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IFT52Q9Y366 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IFT52Q9Y366 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IFT52Q9Y366 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IFT52Q9Y366 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
IFT52Q9Y366 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IFT52Q9Y366 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
IFT52Q9Y366 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.84■□□□□ 0.93
IFT52Q9Y366 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
IFT52Q9Y366 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
IFT52Q9Y366 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
IFT52Q9Y366 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
IFT52Q9Y366 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
IFT52Q9Y366 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.83■□□□□ 0.93
IFT52Q9Y366 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.83■□□□□ 0.93
IFT52Q9Y366 SNX5-217ENST00000606557 1087 ntBASIC20.83■□□□□ 0.93
IFT52Q9Y366 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.83■□□□□ 0.93
IFT52Q9Y366 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
IFT52Q9Y366 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
IFT52Q9Y366 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
IFT52Q9Y366 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFT52Q9Y366 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.82■□□□□ 0.92
IFT52Q9Y366 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
IFT52Q9Y366 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.82■□□□□ 0.92
IFT52Q9Y366 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFT52Q9Y366 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
IFT52Q9Y366 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
IFT52Q9Y366 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFT52Q9Y366 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.82■□□□□ 0.92
IFT52Q9Y366 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.82■□□□□ 0.92
IFT52Q9Y366 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.82■□□□□ 0.92
IFT52Q9Y366 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.82■□□□□ 0.92
IFT52Q9Y366 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
IFT52Q9Y366 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFT52Q9Y366 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
IFT52Q9Y366 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
IFT52Q9Y366 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFT52Q9Y366 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFT52Q9Y366 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
IFT52Q9Y366 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFT52Q9Y366 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFT52Q9Y366 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFT52Q9Y366 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFT52Q9Y366 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.81■□□□□ 0.92
IFT52Q9Y366 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.81■□□□□ 0.92
IFT52Q9Y366 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.81■□□□□ 0.92
IFT52Q9Y366 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
IFT52Q9Y366 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
IFT52Q9Y366 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms