Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.91■□□□□ 0.78
COPS3Q9UNS2 MIR4281-201ENST00000580852 62 ntBASIC19.91■□□□□ 0.78
COPS3Q9UNS2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPS3Q9UNS2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COPS3Q9UNS2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPS3Q9UNS2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
COPS3Q9UNS2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPS3Q9UNS2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPS3Q9UNS2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPS3Q9UNS2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COPS3Q9UNS2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COPS3Q9UNS2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COPS3Q9UNS2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.89■□□□□ 0.77
COPS3Q9UNS2 AC004987.1-201ENST00000428627 508 ntBASIC19.89■□□□□ 0.77
COPS3Q9UNS2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
COPS3Q9UNS2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
COPS3Q9UNS2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPS3Q9UNS2 BHLHE23-202ENST00000612929 1109 ntBASIC19.89■□□□□ 0.77
COPS3Q9UNS2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPS3Q9UNS2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPS3Q9UNS2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COPS3Q9UNS2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPS3Q9UNS2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPS3Q9UNS2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.88■□□□□ 0.77
COPS3Q9UNS2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COPS3Q9UNS2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.88■□□□□ 0.77
COPS3Q9UNS2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
COPS3Q9UNS2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPS3Q9UNS2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COPS3Q9UNS2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
COPS3Q9UNS2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.87■□□□□ 0.77
COPS3Q9UNS2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COPS3Q9UNS2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COPS3Q9UNS2 KRT18P24-201ENST00000344739 1156 ntBASIC19.87■□□□□ 0.77
COPS3Q9UNS2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.87■□□□□ 0.77
COPS3Q9UNS2 ATP5G2P3-201ENST00000429083 425 ntBASIC19.87■□□□□ 0.77
COPS3Q9UNS2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.87■□□□□ 0.77
COPS3Q9UNS2 THA1P-201ENST00000590384 1145 ntBASIC19.87■□□□□ 0.77
COPS3Q9UNS2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
COPS3Q9UNS2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.87■□□□□ 0.77
COPS3Q9UNS2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COPS3Q9UNS2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COPS3Q9UNS2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.87■□□□□ 0.77
COPS3Q9UNS2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.87■□□□□ 0.77
COPS3Q9UNS2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COPS3Q9UNS2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.86■□□□□ 0.77
COPS3Q9UNS2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
COPS3Q9UNS2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.86■□□□□ 0.77
COPS3Q9UNS2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COPS3Q9UNS2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COPS3Q9UNS2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.86■□□□□ 0.77
COPS3Q9UNS2 AC004448.1-201ENST00000458332 883 ntBASIC19.86■□□□□ 0.77
COPS3Q9UNS2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
COPS3Q9UNS2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COPS3Q9UNS2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
COPS3Q9UNS2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COPS3Q9UNS2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.86■□□□□ 0.77
COPS3Q9UNS2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COPS3Q9UNS2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
COPS3Q9UNS2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPS3Q9UNS2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
COPS3Q9UNS2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPS3Q9UNS2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPS3Q9UNS2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.85■□□□□ 0.77
COPS3Q9UNS2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPS3Q9UNS2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.85■□□□□ 0.77
COPS3Q9UNS2 AC010980.1-201ENST00000587192 1142 ntBASIC19.85■□□□□ 0.77
COPS3Q9UNS2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPS3Q9UNS2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPS3Q9UNS2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPS3Q9UNS2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
COPS3Q9UNS2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPS3Q9UNS2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPS3Q9UNS2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.84■□□□□ 0.77
COPS3Q9UNS2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.84■□□□□ 0.77
COPS3Q9UNS2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
COPS3Q9UNS2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPS3Q9UNS2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPS3Q9UNS2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPS3Q9UNS2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms