Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL20A1Q9P218 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.55■■□□□ 1.68
COL20A1Q9P218 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.55■■□□□ 1.68
COL20A1Q9P218 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL20A1Q9P218 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL20A1Q9P218 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.55■■□□□ 1.68
COL20A1Q9P218 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL20A1Q9P218 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL20A1Q9P218 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL20A1Q9P218 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL20A1Q9P218 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL20A1Q9P218 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL20A1Q9P218 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL20A1Q9P218 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL20A1Q9P218 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
COL20A1Q9P218 SLC47A1P1-202ENST00000449666 945 ntBASIC25.54■■□□□ 1.68
COL20A1Q9P218 AL499627.2-201ENST00000606283 725 ntBASIC25.54■■□□□ 1.68
COL20A1Q9P218 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL20A1Q9P218 AC144652.1-201ENST00000609974 1624 ntBASIC25.54■■□□□ 1.68
COL20A1Q9P218 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
COL20A1Q9P218 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.54■■□□□ 1.68
COL20A1Q9P218 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL20A1Q9P218 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL20A1Q9P218 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL20A1Q9P218 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL20A1Q9P218 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL20A1Q9P218 DUX4L4-201ENST00000566884 1269 ntBASIC25.53■■□□□ 1.68
COL20A1Q9P218 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL20A1Q9P218 FP325331.1-202ENST00000623531 1380 ntBASIC25.53■■□□□ 1.68
COL20A1Q9P218 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
COL20A1Q9P218 AC133637.1-201ENST00000624115 1537 ntBASIC25.53■■□□□ 1.68
COL20A1Q9P218 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL20A1Q9P218 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL20A1Q9P218 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.52■■□□□ 1.68
COL20A1Q9P218 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.52■■□□□ 1.68
COL20A1Q9P218 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.52■■□□□ 1.68
COL20A1Q9P218 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL20A1Q9P218 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
COL20A1Q9P218 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.52■■□□□ 1.68
COL20A1Q9P218 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COL20A1Q9P218 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL20A1Q9P218 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL20A1Q9P218 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
COL20A1Q9P218 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COL20A1Q9P218 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.51■■□□□ 1.67
COL20A1Q9P218 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL20A1Q9P218 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.51■■□□□ 1.67
COL20A1Q9P218 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.51■■□□□ 1.67
COL20A1Q9P218 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.51■■□□□ 1.67
COL20A1Q9P218 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL20A1Q9P218 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL20A1Q9P218 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL20A1Q9P218 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.5■■□□□ 1.67
COL20A1Q9P218 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
COL20A1Q9P218 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL20A1Q9P218 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL20A1Q9P218 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL20A1Q9P218 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
COL20A1Q9P218 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL20A1Q9P218 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.49■■□□□ 1.67
COL20A1Q9P218 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.49■■□□□ 1.67
COL20A1Q9P218 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.49■■□□□ 1.67
COL20A1Q9P218 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
COL20A1Q9P218 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL20A1Q9P218 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.49■■□□□ 1.67
COL20A1Q9P218 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.48■■□□□ 1.67
COL20A1Q9P218 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL20A1Q9P218 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
COL20A1Q9P218 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL20A1Q9P218 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
COL20A1Q9P218 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.48■■□□□ 1.67
COL20A1Q9P218 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.48■■□□□ 1.67
COL20A1Q9P218 AC010525.1-201ENST00000585559 441 ntBASIC25.48■■□□□ 1.67
COL20A1Q9P218 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
COL20A1Q9P218 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
COL20A1Q9P218 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
COL20A1Q9P218 AC079630.1-202ENST00000618127 1840 ntBASIC25.47■■□□□ 1.67
COL20A1Q9P218 LINC01529-204ENST00000636474 1715 ntBASIC25.47■■□□□ 1.67
COL20A1Q9P218 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL20A1Q9P218 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
COL20A1Q9P218 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.47■■□□□ 1.67
COL20A1Q9P218 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.47■■□□□ 1.67
COL20A1Q9P218 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
COL20A1Q9P218 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
COL20A1Q9P218 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.47■■□□□ 1.67
COL20A1Q9P218 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.47■■□□□ 1.67
COL20A1Q9P218 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL20A1Q9P218 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
COL20A1Q9P218 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
COL20A1Q9P218 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
COL20A1Q9P218 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
COL20A1Q9P218 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL20A1Q9P218 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL20A1Q9P218 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
COL20A1Q9P218 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
COL20A1Q9P218 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
COL20A1Q9P218 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.46■■□□□ 1.67
COL20A1Q9P218 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.46■■□□□ 1.67
COL20A1Q9P218 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
COL20A1Q9P218 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms