Protein–RNA interactions for Protein: Q9NY27

PPP4R2, Serine/threonine-protein phosphatase 4 regulatory subunit 2, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R2Q9NY27 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC28.78■■■□□ 2.2
PPP4R2Q9NY27 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
PPP4R2Q9NY27 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
PPP4R2Q9NY27 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PPP4R2Q9NY27 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
PPP4R2Q9NY27 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PPP4R2Q9NY27 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC28.77■■■□□ 2.2
PPP4R2Q9NY27 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PPP4R2Q9NY27 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
PPP4R2Q9NY27 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
PPP4R2Q9NY27 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PPP4R2Q9NY27 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
PPP4R2Q9NY27 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
PPP4R2Q9NY27 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.76■■■□□ 2.2
PPP4R2Q9NY27 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
PPP4R2Q9NY27 MED17-221ENST00000639724 2317 ntTSL 5 BASIC28.76■■■□□ 2.2
PPP4R2Q9NY27 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PPP4R2Q9NY27 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC28.76■■■□□ 2.19
PPP4R2Q9NY27 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
PPP4R2Q9NY27 AC131274.2-201ENST00000580697 1507 ntBASIC28.75■■■□□ 2.19
PPP4R2Q9NY27 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PPP4R2Q9NY27 RPS2P7-201ENST00000447334 885 ntBASIC28.75■■■□□ 2.19
PPP4R2Q9NY27 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PPP4R2Q9NY27 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
PPP4R2Q9NY27 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.75■■■□□ 2.19
PPP4R2Q9NY27 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
PPP4R2Q9NY27 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC28.75■■■□□ 2.19
PPP4R2Q9NY27 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
PPP4R2Q9NY27 AC080038.3-201ENST00000623346 1952 ntBASIC28.75■■■□□ 2.19
PPP4R2Q9NY27 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.74■■■□□ 2.19
PPP4R2Q9NY27 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PPP4R2Q9NY27 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
PPP4R2Q9NY27 AL592295.1-201ENST00000400984 884 ntBASIC28.74■■■□□ 2.19
PPP4R2Q9NY27 ABHD17AP4-201ENST00000411545 909 ntBASIC28.74■■■□□ 2.19
PPP4R2Q9NY27 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.74■■■□□ 2.19
PPP4R2Q9NY27 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.74■■■□□ 2.19
PPP4R2Q9NY27 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
PPP4R2Q9NY27 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
PPP4R2Q9NY27 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
PPP4R2Q9NY27 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.73■■■□□ 2.19
PPP4R2Q9NY27 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
PPP4R2Q9NY27 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
PPP4R2Q9NY27 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PPP4R2Q9NY27 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
PPP4R2Q9NY27 SLC25A24-204ENST00000569674 2357 ntBASIC28.71■■■□□ 2.19
PPP4R2Q9NY27 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PPP4R2Q9NY27 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
PPP4R2Q9NY27 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
PPP4R2Q9NY27 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
PPP4R2Q9NY27 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.19
PPP4R2Q9NY27 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
PPP4R2Q9NY27 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC28.7■■■□□ 2.18
PPP4R2Q9NY27 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.7■■■□□ 2.18
PPP4R2Q9NY27 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
PPP4R2Q9NY27 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC28.7■■■□□ 2.18
PPP4R2Q9NY27 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
PPP4R2Q9NY27 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC28.7■■■□□ 2.18
PPP4R2Q9NY27 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
PPP4R2Q9NY27 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC28.69■■■□□ 2.18
PPP4R2Q9NY27 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PPP4R2Q9NY27 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
PPP4R2Q9NY27 AC026310.3-201ENST00000625186 2373 ntBASIC28.69■■■□□ 2.18
PPP4R2Q9NY27 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PPP4R2Q9NY27 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC28.69■■■□□ 2.18
PPP4R2Q9NY27 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC28.69■■■□□ 2.18
PPP4R2Q9NY27 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
PPP4R2Q9NY27 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PPP4R2Q9NY27 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PPP4R2Q9NY27 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC28.68■■■□□ 2.18
PPP4R2Q9NY27 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
PPP4R2Q9NY27 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PPP4R2Q9NY27 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PPP4R2Q9NY27 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.67■■■□□ 2.18
PPP4R2Q9NY27 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
PPP4R2Q9NY27 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
PPP4R2Q9NY27 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
PPP4R2Q9NY27 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
PPP4R2Q9NY27 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PPP4R2Q9NY27 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
PPP4R2Q9NY27 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC28.66■■■□□ 2.18
PPP4R2Q9NY27 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PPP4R2Q9NY27 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PPP4R2Q9NY27 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PPP4R2Q9NY27 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
PPP4R2Q9NY27 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
PPP4R2Q9NY27 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PPP4R2Q9NY27 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC28.66■■■□□ 2.18
PPP4R2Q9NY27 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC28.66■■■□□ 2.18
PPP4R2Q9NY27 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC28.66■■■□□ 2.18
PPP4R2Q9NY27 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PPP4R2Q9NY27 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PPP4R2Q9NY27 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC28.65■■■□□ 2.18
PPP4R2Q9NY27 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC28.65■■■□□ 2.18
PPP4R2Q9NY27 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC28.65■■■□□ 2.18
PPP4R2Q9NY27 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.65■■■□□ 2.18
PPP4R2Q9NY27 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC28.65■■■□□ 2.18
PPP4R2Q9NY27 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PPP4R2Q9NY27 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PPP4R2Q9NY27 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
PPP4R2Q9NY27 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms