Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMCO4Q9NRQ5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.64■□□□□ 0.42
SMCO4Q9NRQ5 HLA-L-211ENST00000482052 1765 ntBASIC17.64■□□□□ 0.41
SMCO4Q9NRQ5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO4Q9NRQ5 AC138932.1-201ENST00000534164 6830 ntBASIC17.64■□□□□ 0.41
SMCO4Q9NRQ5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO4Q9NRQ5 ZNRF2P1-201ENST00000441407 443 ntBASIC17.64■□□□□ 0.41
SMCO4Q9NRQ5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO4Q9NRQ5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO4Q9NRQ5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SMCO4Q9NRQ5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO4Q9NRQ5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO4Q9NRQ5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMCO4Q9NRQ5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMCO4Q9NRQ5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMCO4Q9NRQ5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.62■□□□□ 0.41
SMCO4Q9NRQ5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.62■□□□□ 0.41
SMCO4Q9NRQ5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMCO4Q9NRQ5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMCO4Q9NRQ5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SMCO4Q9NRQ5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMCO4Q9NRQ5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMCO4Q9NRQ5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMCO4Q9NRQ5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMCO4Q9NRQ5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SMCO4Q9NRQ5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SMCO4Q9NRQ5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMCO4Q9NRQ5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMCO4Q9NRQ5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.61■□□□□ 0.41
SMCO4Q9NRQ5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMCO4Q9NRQ5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.61■□□□□ 0.41
SMCO4Q9NRQ5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.61■□□□□ 0.41
SMCO4Q9NRQ5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMCO4Q9NRQ5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SMCO4Q9NRQ5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMCO4Q9NRQ5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SMCO4Q9NRQ5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMCO4Q9NRQ5 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMCO4Q9NRQ5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMCO4Q9NRQ5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
SMCO4Q9NRQ5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMCO4Q9NRQ5 AC005229.4-201ENST00000610085 2198 ntBASIC17.6■□□□□ 0.41
SMCO4Q9NRQ5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SMCO4Q9NRQ5 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMCO4Q9NRQ5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.6■□□□□ 0.41
SMCO4Q9NRQ5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMCO4Q9NRQ5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMCO4Q9NRQ5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMCO4Q9NRQ5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMCO4Q9NRQ5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.6■□□□□ 0.41
SMCO4Q9NRQ5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.6■□□□□ 0.41
SMCO4Q9NRQ5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMCO4Q9NRQ5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMCO4Q9NRQ5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SMCO4Q9NRQ5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMCO4Q9NRQ5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.6■□□□□ 0.41
SMCO4Q9NRQ5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMCO4Q9NRQ5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMCO4Q9NRQ5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMCO4Q9NRQ5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMCO4Q9NRQ5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMCO4Q9NRQ5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMCO4Q9NRQ5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.59■□□□□ 0.41
SMCO4Q9NRQ5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMCO4Q9NRQ5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMCO4Q9NRQ5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.59■□□□□ 0.41
SMCO4Q9NRQ5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMCO4Q9NRQ5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SMCO4Q9NRQ5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMCO4Q9NRQ5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.59■□□□□ 0.41
SMCO4Q9NRQ5 AC139530.1-201ENST00000575312 1977 ntBASIC17.59■□□□□ 0.41
SMCO4Q9NRQ5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMCO4Q9NRQ5 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SMCO4Q9NRQ5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMCO4Q9NRQ5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMCO4Q9NRQ5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SMCO4Q9NRQ5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMCO4Q9NRQ5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms