Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB16Q9NRJ7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHB16Q9NRJ7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PCDHB16Q9NRJ7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PCDHB16Q9NRJ7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PCDHB16Q9NRJ7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB16Q9NRJ7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB16Q9NRJ7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB16Q9NRJ7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB16Q9NRJ7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHB16Q9NRJ7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCDHB16Q9NRJ7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHB16Q9NRJ7 AC131274.2-201ENST00000580697 1507 ntBASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 LINC00565-201ENST00000562710 2331 ntBASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB16Q9NRJ7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB16Q9NRJ7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PCDHB16Q9NRJ7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB16Q9NRJ7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB16Q9NRJ7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB16Q9NRJ7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB16Q9NRJ7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB16Q9NRJ7 TSPY13P-201ENST00000338964 914 ntBASIC19.29■□□□□ 0.68
PCDHB16Q9NRJ7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB16Q9NRJ7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB16Q9NRJ7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PCDHB16Q9NRJ7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHB16Q9NRJ7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB16Q9NRJ7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB16Q9NRJ7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB16Q9NRJ7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
PCDHB16Q9NRJ7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB16Q9NRJ7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB16Q9NRJ7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PCDHB16Q9NRJ7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB16Q9NRJ7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB16Q9NRJ7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB16Q9NRJ7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB16Q9NRJ7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB16Q9NRJ7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB16Q9NRJ7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB16Q9NRJ7 AL117328.2-201ENST00000624617 1940 ntBASIC19.28■□□□□ 0.68
PCDHB16Q9NRJ7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB16Q9NRJ7 ATP5G2P3-201ENST00000429083 425 ntBASIC19.28■□□□□ 0.68
PCDHB16Q9NRJ7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB16Q9NRJ7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PCDHB16Q9NRJ7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB16Q9NRJ7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB16Q9NRJ7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB16Q9NRJ7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB16Q9NRJ7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB16Q9NRJ7 KRT18P24-201ENST00000344739 1156 ntBASIC19.27■□□□□ 0.68
PCDHB16Q9NRJ7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHB16Q9NRJ7 DUX4L18-201ENST00000553347 1267 ntBASIC19.27■□□□□ 0.68
PCDHB16Q9NRJ7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHB16Q9NRJ7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB16Q9NRJ7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.27■□□□□ 0.67
PCDHB16Q9NRJ7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDHB16Q9NRJ7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PCDHB16Q9NRJ7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB16Q9NRJ7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB16Q9NRJ7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB16Q9NRJ7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB16Q9NRJ7 THA1P-201ENST00000590384 1145 ntBASIC19.26■□□□□ 0.67
PCDHB16Q9NRJ7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB16Q9NRJ7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB16Q9NRJ7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB16Q9NRJ7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB16Q9NRJ7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB16Q9NRJ7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB16Q9NRJ7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 AC004987.1-201ENST00000428627 508 ntBASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 AC120024.1-201ENST00000562672 995 ntBASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB16Q9NRJ7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms