Protein–RNA interactions for Protein: Q9H8M7

MINDY3, Ubiquitin carboxyl-terminal hydrolase MINDY-3, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3Q9H8M7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.58■■□□□ 1.53
MINDY3Q9H8M7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
MINDY3Q9H8M7 CA15P2-201ENST00000611168 834 ntBASIC24.58■■□□□ 1.53
MINDY3Q9H8M7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
MINDY3Q9H8M7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
MINDY3Q9H8M7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
MINDY3Q9H8M7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MINDY3Q9H8M7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
MINDY3Q9H8M7 RASA4CP-201ENST00000424092 1398 ntBASIC24.57■■□□□ 1.52
MINDY3Q9H8M7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
MINDY3Q9H8M7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
MINDY3Q9H8M7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.57■■□□□ 1.52
MINDY3Q9H8M7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
MINDY3Q9H8M7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.57■■□□□ 1.52
MINDY3Q9H8M7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.56■■□□□ 1.52
MINDY3Q9H8M7 FP325331.1-202ENST00000623531 1380 ntBASIC24.56■■□□□ 1.52
MINDY3Q9H8M7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
MINDY3Q9H8M7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
MINDY3Q9H8M7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MINDY3Q9H8M7 AC099791.1-201ENST00000416440 715 ntBASIC24.56■■□□□ 1.52
MINDY3Q9H8M7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
MINDY3Q9H8M7 AC027682.1-201ENST00000562846 899 ntBASIC24.56■■□□□ 1.52
MINDY3Q9H8M7 DUX4L4-201ENST00000566884 1269 ntBASIC24.56■■□□□ 1.52
MINDY3Q9H8M7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
MINDY3Q9H8M7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
MINDY3Q9H8M7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
MINDY3Q9H8M7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
MINDY3Q9H8M7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
MINDY3Q9H8M7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
MINDY3Q9H8M7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.55■■□□□ 1.52
MINDY3Q9H8M7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
MINDY3Q9H8M7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.55■■□□□ 1.52
MINDY3Q9H8M7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
MINDY3Q9H8M7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
MINDY3Q9H8M7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
MINDY3Q9H8M7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.55■■□□□ 1.52
MINDY3Q9H8M7 AL499627.2-201ENST00000606283 725 ntBASIC24.55■■□□□ 1.52
MINDY3Q9H8M7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.55■■□□□ 1.52
MINDY3Q9H8M7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
MINDY3Q9H8M7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
MINDY3Q9H8M7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 AC079630.1-202ENST00000618127 1840 ntBASIC24.54■■□□□ 1.52
MINDY3Q9H8M7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
MINDY3Q9H8M7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
MINDY3Q9H8M7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.53■■□□□ 1.52
MINDY3Q9H8M7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
MINDY3Q9H8M7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.53■■□□□ 1.52
MINDY3Q9H8M7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.53■■□□□ 1.52
MINDY3Q9H8M7 AC233992.3-201ENST00000607491 485 ntBASIC24.53■■□□□ 1.52
MINDY3Q9H8M7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.53■■□□□ 1.52
MINDY3Q9H8M7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
MINDY3Q9H8M7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.53■■□□□ 1.52
MINDY3Q9H8M7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
MINDY3Q9H8M7 LINC01529-204ENST00000636474 1715 ntBASIC24.52■■□□□ 1.52
MINDY3Q9H8M7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
MINDY3Q9H8M7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
MINDY3Q9H8M7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.52■■□□□ 1.52
MINDY3Q9H8M7 AC133637.1-201ENST00000624115 1537 ntBASIC24.52■■□□□ 1.52
MINDY3Q9H8M7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
MINDY3Q9H8M7 BX842568.3-201ENST00000418104 571 ntBASIC24.52■■□□□ 1.52
MINDY3Q9H8M7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
MINDY3Q9H8M7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.52■■□□□ 1.52
MINDY3Q9H8M7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
MINDY3Q9H8M7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
MINDY3Q9H8M7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
MINDY3Q9H8M7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
MINDY3Q9H8M7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.52■■□□□ 1.52
MINDY3Q9H8M7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
MINDY3Q9H8M7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.51■■□□□ 1.51
MINDY3Q9H8M7 SLC47A1P1-202ENST00000449666 945 ntBASIC24.51■■□□□ 1.51
MINDY3Q9H8M7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.51■■□□□ 1.51
MINDY3Q9H8M7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
MINDY3Q9H8M7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
MINDY3Q9H8M7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MINDY3Q9H8M7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.5■■□□□ 1.51
MINDY3Q9H8M7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MINDY3Q9H8M7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.5■■□□□ 1.51
MINDY3Q9H8M7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.5■■□□□ 1.51
MINDY3Q9H8M7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
MINDY3Q9H8M7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.5■■□□□ 1.51
MINDY3Q9H8M7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.5■■□□□ 1.51
MINDY3Q9H8M7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
MINDY3Q9H8M7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MINDY3Q9H8M7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.5■■□□□ 1.51
MINDY3Q9H8M7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms