Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALX4Q9H161 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALX4Q9H161 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALX4Q9H161 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALX4Q9H161 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALX4Q9H161 AL592293.1-201ENST00000502889 1188 ntBASIC18.88■□□□□ 0.61
ALX4Q9H161 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
ALX4Q9H161 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALX4Q9H161 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALX4Q9H161 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.88■□□□□ 0.61
ALX4Q9H161 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALX4Q9H161 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALX4Q9H161 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALX4Q9H161 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ALX4Q9H161 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALX4Q9H161 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ALX4Q9H161 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALX4Q9H161 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ALX4Q9H161 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.86■□□□□ 0.61
ALX4Q9H161 FBXW4P1-201ENST00000426721 2239 ntBASIC18.86■□□□□ 0.61
ALX4Q9H161 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ALX4Q9H161 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ALX4Q9H161 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ALX4Q9H161 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ALX4Q9H161 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ALX4Q9H161 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ALX4Q9H161 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.86■□□□□ 0.61
ALX4Q9H161 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.86■□□□□ 0.61
ALX4Q9H161 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ALX4Q9H161 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ALX4Q9H161 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ALX4Q9H161 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.86■□□□□ 0.61
ALX4Q9H161 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.86■□□□□ 0.61
ALX4Q9H161 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ALX4Q9H161 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.86■□□□□ 0.61
ALX4Q9H161 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ALX4Q9H161 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ALX4Q9H161 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ALX4Q9H161 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ALX4Q9H161 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.86■□□□□ 0.61
ALX4Q9H161 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.86■□□□□ 0.61
ALX4Q9H161 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
ALX4Q9H161 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALX4Q9H161 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALX4Q9H161 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALX4Q9H161 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALX4Q9H161 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ALX4Q9H161 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALX4Q9H161 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALX4Q9H161 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.85■□□□□ 0.61
ALX4Q9H161 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.85■□□□□ 0.61
ALX4Q9H161 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.85■□□□□ 0.61
ALX4Q9H161 RAP2CP1-202ENST00000605179 643 ntBASIC18.85■□□□□ 0.61
ALX4Q9H161 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALX4Q9H161 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALX4Q9H161 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ALX4Q9H161 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ALX4Q9H161 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALX4Q9H161 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ALX4Q9H161 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALX4Q9H161 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.84■□□□□ 0.61
ALX4Q9H161 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ALX4Q9H161 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.84■□□□□ 0.61
ALX4Q9H161 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALX4Q9H161 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALX4Q9H161 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.84■□□□□ 0.61
ALX4Q9H161 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.84■□□□□ 0.61
ALX4Q9H161 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALX4Q9H161 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALX4Q9H161 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ALX4Q9H161 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.84■□□□□ 0.61
ALX4Q9H161 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ALX4Q9H161 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALX4Q9H161 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ALX4Q9H161 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
ALX4Q9H161 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALX4Q9H161 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
ALX4Q9H161 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALX4Q9H161 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ALX4Q9H161 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALX4Q9H161 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ALX4Q9H161 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ALX4Q9H161 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALX4Q9H161 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALX4Q9H161 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
ALX4Q9H161 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ALX4Q9H161 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALX4Q9H161 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALX4Q9H161 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ALX4Q9H161 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.82■□□□□ 0.6
ALX4Q9H161 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALX4Q9H161 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ALX4Q9H161 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ALX4Q9H161 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.82■□□□□ 0.6
ALX4Q9H161 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ALX4Q9H161 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALX4Q9H161 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALX4Q9H161 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ALX4Q9H161 AC012354.3-201ENST00000623734 483 ntBASIC18.82■□□□□ 0.6
ALX4Q9H161 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms