Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC233992.3-201ENST00000607491 485 ntBASIC23.34■■□□□ 1.33
RNF38Q9H0F5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.34■■□□□ 1.33
RNF38Q9H0F5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF38Q9H0F5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF38Q9H0F5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF38Q9H0F5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.33■■□□□ 1.33
RNF38Q9H0F5 BX842568.3-201ENST00000418104 571 ntBASIC23.33■■□□□ 1.33
RNF38Q9H0F5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.33■■□□□ 1.33
RNF38Q9H0F5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RNF38Q9H0F5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
RNF38Q9H0F5 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
RNF38Q9H0F5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF38Q9H0F5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF38Q9H0F5 FP325331.1-202ENST00000623531 1380 ntBASIC23.32■■□□□ 1.32
RNF38Q9H0F5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF38Q9H0F5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF38Q9H0F5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.32■■□□□ 1.32
RNF38Q9H0F5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF38Q9H0F5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF38Q9H0F5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF38Q9H0F5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RNF38Q9H0F5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RNF38Q9H0F5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RNF38Q9H0F5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
RNF38Q9H0F5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RNF38Q9H0F5 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF38Q9H0F5 ABCB10P4-201ENST00000566803 2184 ntBASIC23.31■■□□□ 1.32
RNF38Q9H0F5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
RNF38Q9H0F5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RNF38Q9H0F5 RARRES2P6-201ENST00000567333 442 ntBASIC23.31■■□□□ 1.32
RNF38Q9H0F5 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.31■■□□□ 1.32
RNF38Q9H0F5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF38Q9H0F5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF38Q9H0F5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.3■■□□□ 1.32
RNF38Q9H0F5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.3■■□□□ 1.32
RNF38Q9H0F5 AC026271.2-201ENST00000428091 497 ntBASIC23.3■■□□□ 1.32
RNF38Q9H0F5 AC144652.1-201ENST00000609974 1624 ntBASIC23.3■■□□□ 1.32
RNF38Q9H0F5 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF38Q9H0F5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF38Q9H0F5 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF38Q9H0F5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF38Q9H0F5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
RNF38Q9H0F5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF38Q9H0F5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF38Q9H0F5 DUX4L4-201ENST00000566884 1269 ntBASIC23.29■■□□□ 1.32
RNF38Q9H0F5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
RNF38Q9H0F5 AL499627.2-201ENST00000606283 725 ntBASIC23.29■■□□□ 1.32
RNF38Q9H0F5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RNF38Q9H0F5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF38Q9H0F5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF38Q9H0F5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF38Q9H0F5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.28■■□□□ 1.32
RNF38Q9H0F5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RNF38Q9H0F5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.28■■□□□ 1.32
RNF38Q9H0F5 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF38Q9H0F5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RNF38Q9H0F5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF38Q9H0F5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.28■■□□□ 1.32
RNF38Q9H0F5 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF38Q9H0F5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF38Q9H0F5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF38Q9H0F5 AC133637.1-201ENST00000624115 1537 ntBASIC23.28■■□□□ 1.32
RNF38Q9H0F5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF38Q9H0F5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
RNF38Q9H0F5 SLC47A1P1-202ENST00000449666 945 ntBASIC23.27■■□□□ 1.32
RNF38Q9H0F5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
RNF38Q9H0F5 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.27■■□□□ 1.32
RNF38Q9H0F5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RNF38Q9H0F5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF38Q9H0F5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
RNF38Q9H0F5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
RNF38Q9H0F5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF38Q9H0F5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF38Q9H0F5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.26■■□□□ 1.31
RNF38Q9H0F5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF38Q9H0F5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF38Q9H0F5 LINC01529-204ENST00000636474 1715 ntBASIC23.26■■□□□ 1.31
RNF38Q9H0F5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF38Q9H0F5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF38Q9H0F5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.26■■□□□ 1.31
RNF38Q9H0F5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.26■■□□□ 1.31
RNF38Q9H0F5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RNF38Q9H0F5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.26■■□□□ 1.31
RNF38Q9H0F5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.26■■□□□ 1.31
RNF38Q9H0F5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RNF38Q9H0F5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.25■■□□□ 1.31
RNF38Q9H0F5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
RNF38Q9H0F5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF38Q9H0F5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF38Q9H0F5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
RNF38Q9H0F5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF38Q9H0F5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RNF38Q9H0F5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.25■■□□□ 1.31
RNF38Q9H0F5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF38Q9H0F5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.25■■□□□ 1.31
RNF38Q9H0F5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF38Q9H0F5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RNF38Q9H0F5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
RNF38Q9H0F5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RNF38Q9H0F5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms