Protein–RNA interactions for Protein: Q9BR84

ZNF559, Zinc finger protein 559, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559Q9BR84 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF559Q9BR84 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF559Q9BR84 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF559Q9BR84 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ZNF559Q9BR84 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.7■□□□□ 0.91
ZNF559Q9BR84 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF559Q9BR84 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF559Q9BR84 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF559Q9BR84 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF559Q9BR84 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF559Q9BR84 MIR3621-201ENST00000580529 85 ntBASIC20.7■□□□□ 0.9
ZNF559Q9BR84 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.7■□□□□ 0.9
ZNF559Q9BR84 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ZNF559Q9BR84 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ZNF559Q9BR84 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF559Q9BR84 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF559Q9BR84 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF559Q9BR84 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF559Q9BR84 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.69■□□□□ 0.9
ZNF559Q9BR84 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF559Q9BR84 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF559Q9BR84 AC110285.6-201ENST00000617652 491 ntBASIC20.69■□□□□ 0.9
ZNF559Q9BR84 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF559Q9BR84 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ZNF559Q9BR84 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 AC096631.2-201ENST00000436136 790 ntBASIC20.68■□□□□ 0.9
ZNF559Q9BR84 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 AC005837.3-201ENST00000612163 286 ntBASIC20.68■□□□□ 0.9
ZNF559Q9BR84 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF559Q9BR84 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF559Q9BR84 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.67■□□□□ 0.9
ZNF559Q9BR84 SNX5-217ENST00000606557 1087 ntBASIC20.67■□□□□ 0.9
ZNF559Q9BR84 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF559Q9BR84 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF559Q9BR84 C9orf163-202ENST00000624034 2573 ntBASIC20.67■□□□□ 0.9
ZNF559Q9BR84 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF559Q9BR84 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF559Q9BR84 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
ZNF559Q9BR84 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF559Q9BR84 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF559Q9BR84 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
ZNF559Q9BR84 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF559Q9BR84 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF559Q9BR84 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF559Q9BR84 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF559Q9BR84 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ZNF559Q9BR84 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF559Q9BR84 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF559Q9BR84 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.65■□□□□ 0.9
ZNF559Q9BR84 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF559Q9BR84 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF559Q9BR84 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.64■□□□□ 0.9
ZNF559Q9BR84 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF559Q9BR84 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF559Q9BR84 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.64■□□□□ 0.89
ZNF559Q9BR84 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF559Q9BR84 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.64■□□□□ 0.89
ZNF559Q9BR84 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
ZNF559Q9BR84 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF559Q9BR84 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF559Q9BR84 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ZNF559Q9BR84 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF559Q9BR84 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ZNF559Q9BR84 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.63■□□□□ 0.89
ZNF559Q9BR84 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.63■□□□□ 0.89
ZNF559Q9BR84 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF559Q9BR84 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.63■□□□□ 0.89
ZNF559Q9BR84 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms