Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TMEM54Q969K7 C17orf82-201ENST00000623772 1530 ntBASIC19.8■□□□□ 0.76
TMEM54Q969K7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM54Q969K7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM54Q969K7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM54Q969K7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.79■□□□□ 0.76
TMEM54Q969K7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM54Q969K7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TMEM54Q969K7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM54Q969K7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM54Q969K7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TMEM54Q969K7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.79■□□□□ 0.76
TMEM54Q969K7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM54Q969K7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.78■□□□□ 0.76
TMEM54Q969K7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM54Q969K7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
TMEM54Q969K7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TMEM54Q969K7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
TMEM54Q969K7 LINC01529-204ENST00000636474 1715 ntBASIC19.78■□□□□ 0.76
TMEM54Q969K7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TMEM54Q969K7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.78■□□□□ 0.76
TMEM54Q969K7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM54Q969K7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM54Q969K7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM54Q969K7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM54Q969K7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TMEM54Q969K7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TMEM54Q969K7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.77■□□□□ 0.76
TMEM54Q969K7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
TMEM54Q969K7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.77■□□□□ 0.76
TMEM54Q969K7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TMEM54Q969K7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM54Q969K7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM54Q969K7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
TMEM54Q969K7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM54Q969K7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM54Q969K7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM54Q969K7 DUX4L4-201ENST00000566884 1269 ntBASIC19.76■□□□□ 0.75
TMEM54Q969K7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM54Q969K7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.76■□□□□ 0.75
TMEM54Q969K7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM54Q969K7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEM54Q969K7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEM54Q969K7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM54Q969K7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM54Q969K7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.75■□□□□ 0.75
TMEM54Q969K7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM54Q969K7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.75■□□□□ 0.75
TMEM54Q969K7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.75■□□□□ 0.75
TMEM54Q969K7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.75■□□□□ 0.75
TMEM54Q969K7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM54Q969K7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.74■□□□□ 0.75
TMEM54Q969K7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM54Q969K7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
TMEM54Q969K7 AC068473.5-201ENST00000616428 2072 ntBASIC19.74■□□□□ 0.75
TMEM54Q969K7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM54Q969K7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM54Q969K7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM54Q969K7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.74■□□□□ 0.75
TMEM54Q969K7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.74■□□□□ 0.75
TMEM54Q969K7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM54Q969K7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.74■□□□□ 0.75
TMEM54Q969K7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEM54Q969K7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.74■□□□□ 0.75
TMEM54Q969K7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.74■□□□□ 0.75
TMEM54Q969K7 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.74■□□□□ 0.75
TMEM54Q969K7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.74■□□□□ 0.75
TMEM54Q969K7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TMEM54Q969K7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM54Q969K7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM54Q969K7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.73■□□□□ 0.75
TMEM54Q969K7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.73■□□□□ 0.75
TMEM54Q969K7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM54Q969K7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM54Q969K7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
TMEM54Q969K7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM54Q969K7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM54Q969K7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TMEM54Q969K7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEM54Q969K7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM54Q969K7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM54Q969K7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM54Q969K7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM54Q969K7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.72■□□□□ 0.75
TMEM54Q969K7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TMEM54Q969K7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.72■□□□□ 0.75
TMEM54Q969K7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.72■□□□□ 0.75
TMEM54Q969K7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.72■□□□□ 0.75
TMEM54Q969K7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEM54Q969K7 AL512631.2-201ENST00000604634 923 ntBASIC19.72■□□□□ 0.75
TMEM54Q969K7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM54Q969K7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEM54Q969K7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM54Q969K7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM54Q969K7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM54Q969K7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.71■□□□□ 0.75
TMEM54Q969K7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM54Q969K7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM54Q969K7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM54Q969K7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms