Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01560Q8TB33 AC010525.1-201ENST00000585559 441 ntBASIC19.49■□□□□ 0.71
LINC01560Q8TB33 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01560Q8TB33 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01560Q8TB33 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
LINC01560Q8TB33 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.49■□□□□ 0.71
LINC01560Q8TB33 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC01560Q8TB33 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
LINC01560Q8TB33 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.49■□□□□ 0.71
LINC01560Q8TB33 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.48■□□□□ 0.71
LINC01560Q8TB33 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01560Q8TB33 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01560Q8TB33 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LINC01560Q8TB33 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.48■□□□□ 0.71
LINC01560Q8TB33 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01560Q8TB33 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.48■□□□□ 0.71
LINC01560Q8TB33 AC022517.1-201ENST00000592429 346 ntBASIC19.48■□□□□ 0.71
LINC01560Q8TB33 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01560Q8TB33 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01560Q8TB33 AL358852.1-201ENST00000623174 1268 ntBASIC19.48■□□□□ 0.71
LINC01560Q8TB33 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.48■□□□□ 0.71
LINC01560Q8TB33 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01560Q8TB33 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LINC01560Q8TB33 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01560Q8TB33 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01560Q8TB33 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
LINC01560Q8TB33 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01560Q8TB33 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
LINC01560Q8TB33 MIR572-201ENST00000384983 95 ntBASIC19.47■□□□□ 0.71
LINC01560Q8TB33 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.47■□□□□ 0.71
LINC01560Q8TB33 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.47■□□□□ 0.71
LINC01560Q8TB33 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
LINC01560Q8TB33 KRT18P5-201ENST00000436075 1291 ntBASIC19.47■□□□□ 0.71
LINC01560Q8TB33 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.47■□□□□ 0.71
LINC01560Q8TB33 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.47■□□□□ 0.71
LINC01560Q8TB33 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01560Q8TB33 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
LINC01560Q8TB33 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC01560Q8TB33 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.47■□□□□ 0.71
LINC01560Q8TB33 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LINC01560Q8TB33 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01560Q8TB33 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.46■□□□□ 0.71
LINC01560Q8TB33 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01560Q8TB33 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01560Q8TB33 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.46■□□□□ 0.71
LINC01560Q8TB33 DUX4L2-201ENST00000561772 1275 ntBASIC19.46■□□□□ 0.71
LINC01560Q8TB33 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
LINC01560Q8TB33 DUX4L6-201ENST00000626483 1275 ntBASIC19.46■□□□□ 0.71
LINC01560Q8TB33 DUX4L1-201ENST00000627662 1275 ntBASIC19.46■□□□□ 0.71
LINC01560Q8TB33 DUX4L8-201ENST00000629013 1275 ntBASIC19.46■□□□□ 0.71
LINC01560Q8TB33 DUX4L3-201ENST00000630187 1275 ntBASIC19.46■□□□□ 0.71
LINC01560Q8TB33 DUX4L7-201ENST00000630678 1275 ntBASIC19.46■□□□□ 0.71
LINC01560Q8TB33 DUX4L5-201ENST00000630834 1275 ntBASIC19.46■□□□□ 0.71
LINC01560Q8TB33 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.46■□□□□ 0.71
LINC01560Q8TB33 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01560Q8TB33 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC01560Q8TB33 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LINC01560Q8TB33 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.45■□□□□ 0.7
LINC01560Q8TB33 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
LINC01560Q8TB33 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LINC01560Q8TB33 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.45■□□□□ 0.7
LINC01560Q8TB33 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01560Q8TB33 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.45■□□□□ 0.7
LINC01560Q8TB33 AL499627.2-201ENST00000606283 725 ntBASIC19.45■□□□□ 0.7
LINC01560Q8TB33 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01560Q8TB33 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LINC01560Q8TB33 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01560Q8TB33 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.45■□□□□ 0.7
LINC01560Q8TB33 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC01560Q8TB33 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.45■□□□□ 0.7
LINC01560Q8TB33 AC138932.3-201ENST00000567634 1902 ntBASIC19.45■□□□□ 0.7
LINC01560Q8TB33 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01560Q8TB33 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LINC01560Q8TB33 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01560Q8TB33 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01560Q8TB33 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01560Q8TB33 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01560Q8TB33 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LINC01560Q8TB33 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01560Q8TB33 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01560Q8TB33 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.44■□□□□ 0.7
LINC01560Q8TB33 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01560Q8TB33 AC012414.1-201ENST00000556676 535 ntBASIC19.44■□□□□ 0.7
LINC01560Q8TB33 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01560Q8TB33 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LINC01560Q8TB33 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.44■□□□□ 0.7
LINC01560Q8TB33 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC01560Q8TB33 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC01560Q8TB33 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LINC01560Q8TB33 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.43■□□□□ 0.7
LINC01560Q8TB33 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.43■□□□□ 0.7
LINC01560Q8TB33 AC027612.3-201ENST00000413684 1047 ntBASIC19.43■□□□□ 0.7
LINC01560Q8TB33 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.43■□□□□ 0.7
LINC01560Q8TB33 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.43■□□□□ 0.7
LINC01560Q8TB33 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
LINC01560Q8TB33 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LINC01560Q8TB33 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.43■□□□□ 0.7
LINC01560Q8TB33 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.43■□□□□ 0.7
LINC01560Q8TB33 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.43■□□□□ 0.7
LINC01560Q8TB33 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms