Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NUP43Q8NFH3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUP43Q8NFH3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NUP43Q8NFH3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.96■□□□□ 0.95
NUP43Q8NFH3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
NUP43Q8NFH3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
NUP43Q8NFH3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUP43Q8NFH3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUP43Q8NFH3 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.95■□□□□ 0.94
NUP43Q8NFH3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.95■□□□□ 0.94
NUP43Q8NFH3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NUP43Q8NFH3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NUP43Q8NFH3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NUP43Q8NFH3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NUP43Q8NFH3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUP43Q8NFH3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUP43Q8NFH3 AL353803.4-201ENST00000565882 1934 ntBASIC20.94■□□□□ 0.94
NUP43Q8NFH3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NUP43Q8NFH3 AC144652.1-201ENST00000609974 1624 ntBASIC20.94■□□□□ 0.94
NUP43Q8NFH3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUP43Q8NFH3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NUP43Q8NFH3 UNC93B8-201ENST00000511903 705 ntBASIC20.94■□□□□ 0.94
NUP43Q8NFH3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.94■□□□□ 0.94
NUP43Q8NFH3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUP43Q8NFH3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.94■□□□□ 0.94
NUP43Q8NFH3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NUP43Q8NFH3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NUP43Q8NFH3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NUP43Q8NFH3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NUP43Q8NFH3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUP43Q8NFH3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.93■□□□□ 0.94
NUP43Q8NFH3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NUP43Q8NFH3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUP43Q8NFH3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUP43Q8NFH3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUP43Q8NFH3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.93■□□□□ 0.94
NUP43Q8NFH3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NUP43Q8NFH3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.93■□□□□ 0.94
NUP43Q8NFH3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NUP43Q8NFH3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NUP43Q8NFH3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.92■□□□□ 0.94
NUP43Q8NFH3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUP43Q8NFH3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NUP43Q8NFH3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUP43Q8NFH3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUP43Q8NFH3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.92■□□□□ 0.94
NUP43Q8NFH3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
NUP43Q8NFH3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NUP43Q8NFH3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NUP43Q8NFH3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NUP43Q8NFH3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
NUP43Q8NFH3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NUP43Q8NFH3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.91■□□□□ 0.94
NUP43Q8NFH3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NUP43Q8NFH3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
NUP43Q8NFH3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.91■□□□□ 0.94
NUP43Q8NFH3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NUP43Q8NFH3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
NUP43Q8NFH3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.9■□□□□ 0.94
NUP43Q8NFH3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP43Q8NFH3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP43Q8NFH3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP43Q8NFH3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NUP43Q8NFH3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.9■□□□□ 0.94
NUP43Q8NFH3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP43Q8NFH3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.9■□□□□ 0.94
NUP43Q8NFH3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
NUP43Q8NFH3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NUP43Q8NFH3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
NUP43Q8NFH3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.89■□□□□ 0.94
NUP43Q8NFH3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.89■□□□□ 0.94
NUP43Q8NFH3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NUP43Q8NFH3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
NUP43Q8NFH3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.89■□□□□ 0.93
NUP43Q8NFH3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.89■□□□□ 0.93
NUP43Q8NFH3 MIR6724-1-201ENST00000616420 92 ntBASIC20.89■□□□□ 0.93
NUP43Q8NFH3 MIR6724-2-201ENST00000616483 92 ntBASIC20.89■□□□□ 0.93
NUP43Q8NFH3 MIR6724-4-201ENST00000617390 92 ntBASIC20.89■□□□□ 0.93
NUP43Q8NFH3 MIR6724-3-201ENST00000622482 92 ntBASIC20.89■□□□□ 0.93
NUP43Q8NFH3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NUP43Q8NFH3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.89■□□□□ 0.93
NUP43Q8NFH3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
NUP43Q8NFH3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NUP43Q8NFH3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms