Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SLC44A5Q8NCS7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SLC44A5Q8NCS7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
SLC44A5Q8NCS7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
SLC44A5Q8NCS7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SLC44A5Q8NCS7 RASA4CP-201ENST00000424092 1398 ntBASIC26.5■■□□□ 1.83
SLC44A5Q8NCS7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
SLC44A5Q8NCS7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SLC44A5Q8NCS7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SLC44A5Q8NCS7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.5■■□□□ 1.83
SLC44A5Q8NCS7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
SLC44A5Q8NCS7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SLC44A5Q8NCS7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
SLC44A5Q8NCS7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.5■■□□□ 1.83
SLC44A5Q8NCS7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
SLC44A5Q8NCS7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
SLC44A5Q8NCS7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SLC44A5Q8NCS7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.49■■□□□ 1.83
SLC44A5Q8NCS7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.49■■□□□ 1.83
SLC44A5Q8NCS7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SLC44A5Q8NCS7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
SLC44A5Q8NCS7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.48■■□□□ 1.83
SLC44A5Q8NCS7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.48■■□□□ 1.83
SLC44A5Q8NCS7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.48■■□□□ 1.83
SLC44A5Q8NCS7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.48■■□□□ 1.83
SLC44A5Q8NCS7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SLC44A5Q8NCS7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.48■■□□□ 1.83
SLC44A5Q8NCS7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
SLC44A5Q8NCS7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
SLC44A5Q8NCS7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
SLC44A5Q8NCS7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.48■■□□□ 1.83
SLC44A5Q8NCS7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.47■■□□□ 1.83
SLC44A5Q8NCS7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SLC44A5Q8NCS7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SLC44A5Q8NCS7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.47■■□□□ 1.83
SLC44A5Q8NCS7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SLC44A5Q8NCS7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SLC44A5Q8NCS7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SLC44A5Q8NCS7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
SLC44A5Q8NCS7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
SLC44A5Q8NCS7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SLC44A5Q8NCS7 AC144652.1-201ENST00000609974 1624 ntBASIC26.46■■□□□ 1.83
SLC44A5Q8NCS7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SLC44A5Q8NCS7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.46■■□□□ 1.83
SLC44A5Q8NCS7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.46■■□□□ 1.83
SLC44A5Q8NCS7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SLC44A5Q8NCS7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
SLC44A5Q8NCS7 BX842568.3-201ENST00000418104 571 ntBASIC26.45■■□□□ 1.82
SLC44A5Q8NCS7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26.45■■□□□ 1.82
SLC44A5Q8NCS7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.45■■□□□ 1.82
SLC44A5Q8NCS7 SLC47A1P1-202ENST00000449666 945 ntBASIC26.45■■□□□ 1.82
SLC44A5Q8NCS7 AC233992.3-201ENST00000607491 485 ntBASIC26.45■■□□□ 1.82
SLC44A5Q8NCS7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SLC44A5Q8NCS7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SLC44A5Q8NCS7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SLC44A5Q8NCS7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SLC44A5Q8NCS7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SLC44A5Q8NCS7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SLC44A5Q8NCS7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.44■■□□□ 1.82
SLC44A5Q8NCS7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.44■■□□□ 1.82
SLC44A5Q8NCS7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
SLC44A5Q8NCS7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC44A5Q8NCS7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
SLC44A5Q8NCS7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC44A5Q8NCS7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
SLC44A5Q8NCS7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.44■■□□□ 1.82
SLC44A5Q8NCS7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.44■■□□□ 1.82
SLC44A5Q8NCS7 AC133637.1-201ENST00000624115 1537 ntBASIC26.44■■□□□ 1.82
SLC44A5Q8NCS7 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.43■■□□□ 1.82
SLC44A5Q8NCS7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.43■■□□□ 1.82
SLC44A5Q8NCS7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
SLC44A5Q8NCS7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SLC44A5Q8NCS7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
SLC44A5Q8NCS7 DUX4L4-201ENST00000566884 1269 ntBASIC26.43■■□□□ 1.82
SLC44A5Q8NCS7 RARRES2P6-201ENST00000567333 442 ntBASIC26.43■■□□□ 1.82
SLC44A5Q8NCS7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
SLC44A5Q8NCS7 AL499627.2-201ENST00000606283 725 ntBASIC26.43■■□□□ 1.82
SLC44A5Q8NCS7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
SLC44A5Q8NCS7 AC079630.1-202ENST00000618127 1840 ntBASIC26.43■■□□□ 1.82
SLC44A5Q8NCS7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SLC44A5Q8NCS7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SLC44A5Q8NCS7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.43■■□□□ 1.82
SLC44A5Q8NCS7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SLC44A5Q8NCS7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.42■■□□□ 1.82
SLC44A5Q8NCS7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.42■■□□□ 1.82
SLC44A5Q8NCS7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SLC44A5Q8NCS7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SLC44A5Q8NCS7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SLC44A5Q8NCS7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.42■■□□□ 1.82
SLC44A5Q8NCS7 AC026271.2-201ENST00000428091 497 ntBASIC26.42■■□□□ 1.82
SLC44A5Q8NCS7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.42■■□□□ 1.82
SLC44A5Q8NCS7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SLC44A5Q8NCS7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SLC44A5Q8NCS7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SLC44A5Q8NCS7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
SLC44A5Q8NCS7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SLC44A5Q8NCS7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SLC44A5Q8NCS7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.41■■□□□ 1.82
SLC44A5Q8NCS7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SLC44A5Q8NCS7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms