Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRTM2Q8N967 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.35■□□□□ 0.53
LRTM2Q8N967 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRTM2Q8N967 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRTM2Q8N967 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRTM2Q8N967 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.34■□□□□ 0.53
LRTM2Q8N967 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRTM2Q8N967 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRTM2Q8N967 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRTM2Q8N967 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRTM2Q8N967 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRTM2Q8N967 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRTM2Q8N967 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LRTM2Q8N967 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRTM2Q8N967 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.34■□□□□ 0.53
LRTM2Q8N967 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.34■□□□□ 0.53
LRTM2Q8N967 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRTM2Q8N967 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.34■□□□□ 0.53
LRTM2Q8N967 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
LRTM2Q8N967 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRTM2Q8N967 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRTM2Q8N967 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
LRTM2Q8N967 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.33■□□□□ 0.53
LRTM2Q8N967 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRTM2Q8N967 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRTM2Q8N967 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LRTM2Q8N967 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRTM2Q8N967 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.33■□□□□ 0.52
LRTM2Q8N967 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRTM2Q8N967 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRTM2Q8N967 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRTM2Q8N967 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRTM2Q8N967 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRTM2Q8N967 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.32■□□□□ 0.52
LRTM2Q8N967 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRTM2Q8N967 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRTM2Q8N967 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRTM2Q8N967 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.32■□□□□ 0.52
LRTM2Q8N967 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRTM2Q8N967 AC087393.1-201ENST00000582896 145 ntBASIC18.32■□□□□ 0.52
LRTM2Q8N967 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRTM2Q8N967 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRTM2Q8N967 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRTM2Q8N967 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LRTM2Q8N967 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRTM2Q8N967 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRTM2Q8N967 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRTM2Q8N967 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LRTM2Q8N967 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRTM2Q8N967 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRTM2Q8N967 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRTM2Q8N967 AC009831.1-201ENST00000580420 1582 ntBASIC18.31■□□□□ 0.52
LRTM2Q8N967 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRTM2Q8N967 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRTM2Q8N967 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LRTM2Q8N967 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.31■□□□□ 0.52
LRTM2Q8N967 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.31■□□□□ 0.52
LRTM2Q8N967 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRTM2Q8N967 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.31■□□□□ 0.52
LRTM2Q8N967 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRTM2Q8N967 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.31■□□□□ 0.52
LRTM2Q8N967 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRTM2Q8N967 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRTM2Q8N967 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM2Q8N967 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM2Q8N967 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM2Q8N967 FBXW4P1-201ENST00000426721 2239 ntBASIC18.3■□□□□ 0.52
LRTM2Q8N967 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
LRTM2Q8N967 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM2Q8N967 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
LRTM2Q8N967 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM2Q8N967 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM2Q8N967 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LRTM2Q8N967 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LRTM2Q8N967 AC011551.1-201ENST00000614101 683 ntBASIC18.3■□□□□ 0.52
LRTM2Q8N967 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LRTM2Q8N967 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.29■□□□□ 0.52
LRTM2Q8N967 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.29■□□□□ 0.52
LRTM2Q8N967 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRTM2Q8N967 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM2Q8N967 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM2Q8N967 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
LRTM2Q8N967 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM2Q8N967 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM2Q8N967 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM2Q8N967 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM2Q8N967 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM2Q8N967 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
LRTM2Q8N967 AC080038.3-201ENST00000623346 1952 ntBASIC18.29■□□□□ 0.52
LRTM2Q8N967 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM2Q8N967 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM2Q8N967 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM2Q8N967 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRTM2Q8N967 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.28■□□□□ 0.52
LRTM2Q8N967 AC018755.3-202ENST00000596210 929 ntBASIC18.28■□□□□ 0.52
LRTM2Q8N967 AC133552.2-201ENST00000619106 1032 ntBASIC18.28■□□□□ 0.52
LRTM2Q8N967 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRTM2Q8N967 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
LRTM2Q8N967 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRTM2Q8N967 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms