Protein–RNA interactions for Protein: Q8N114

SHISA5, Protein shisa-5, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5Q8N114 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHISA5Q8N114 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.2■□□□□ 0.98
SHISA5Q8N114 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.2■□□□□ 0.98
SHISA5Q8N114 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.2■□□□□ 0.98
SHISA5Q8N114 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SHISA5Q8N114 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHISA5Q8N114 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SHISA5Q8N114 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHISA5Q8N114 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.2■□□□□ 0.98
SHISA5Q8N114 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SHISA5Q8N114 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.19■□□□□ 0.98
SHISA5Q8N114 SERBP1P1-201ENST00000396021 1160 ntBASIC21.19■□□□□ 0.98
SHISA5Q8N114 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.19■□□□□ 0.98
SHISA5Q8N114 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHISA5Q8N114 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHISA5Q8N114 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHISA5Q8N114 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHISA5Q8N114 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.19■□□□□ 0.98
SHISA5Q8N114 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHISA5Q8N114 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHISA5Q8N114 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHISA5Q8N114 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHISA5Q8N114 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHISA5Q8N114 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHISA5Q8N114 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHISA5Q8N114 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHISA5Q8N114 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.18■□□□□ 0.98
SHISA5Q8N114 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.18■□□□□ 0.98
SHISA5Q8N114 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHISA5Q8N114 ANOS2P-203ENST00000472227 1816 ntBASIC21.18■□□□□ 0.98
SHISA5Q8N114 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHISA5Q8N114 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHISA5Q8N114 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHISA5Q8N114 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SHISA5Q8N114 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHISA5Q8N114 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.17■□□□□ 0.98
SHISA5Q8N114 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHISA5Q8N114 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.17■□□□□ 0.98
SHISA5Q8N114 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SHISA5Q8N114 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHISA5Q8N114 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SHISA5Q8N114 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.17■□□□□ 0.98
SHISA5Q8N114 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHISA5Q8N114 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHISA5Q8N114 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHISA5Q8N114 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.16■□□□□ 0.98
SHISA5Q8N114 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHISA5Q8N114 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHISA5Q8N114 MIR638-201ENST00000385237 100 ntBASIC21.16■□□□□ 0.98
SHISA5Q8N114 AC024257.2-201ENST00000549699 147 ntBASIC21.16■□□□□ 0.98
SHISA5Q8N114 AL139246.5-201ENST00000606645 996 ntBASIC21.16■□□□□ 0.98
SHISA5Q8N114 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHISA5Q8N114 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHISA5Q8N114 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHISA5Q8N114 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
SHISA5Q8N114 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SHISA5Q8N114 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHISA5Q8N114 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.15■□□□□ 0.98
SHISA5Q8N114 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.15■□□□□ 0.98
SHISA5Q8N114 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHISA5Q8N114 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SHISA5Q8N114 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SHISA5Q8N114 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.14■□□□□ 0.97
SHISA5Q8N114 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.14■□□□□ 0.97
SHISA5Q8N114 PBX2P1-201ENST00000493219 1291 ntBASIC21.14■□□□□ 0.97
SHISA5Q8N114 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SHISA5Q8N114 AL136162.1-201ENST00000607711 1078 ntBASIC21.14■□□□□ 0.97
SHISA5Q8N114 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHISA5Q8N114 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHISA5Q8N114 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHISA5Q8N114 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHISA5Q8N114 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHISA5Q8N114 C9orf163-202ENST00000624034 2573 ntBASIC21.13■□□□□ 0.97
SHISA5Q8N114 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SHISA5Q8N114 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SHISA5Q8N114 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHISA5Q8N114 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.13■□□□□ 0.97
SHISA5Q8N114 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.13■□□□□ 0.97
SHISA5Q8N114 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.13■□□□□ 0.97
SHISA5Q8N114 MIR3181-201ENST00000578512 73 ntBASIC21.13■□□□□ 0.97
SHISA5Q8N114 AL031432.3-201ENST00000607698 485 ntBASIC21.13■□□□□ 0.97
SHISA5Q8N114 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHISA5Q8N114 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SHISA5Q8N114 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHISA5Q8N114 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHISA5Q8N114 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHISA5Q8N114 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHISA5Q8N114 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHISA5Q8N114 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHISA5Q8N114 AL353803.4-201ENST00000565882 1934 ntBASIC21.12■□□□□ 0.97
SHISA5Q8N114 AC144652.1-201ENST00000609974 1624 ntBASIC21.12■□□□□ 0.97
SHISA5Q8N114 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHISA5Q8N114 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
SHISA5Q8N114 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHISA5Q8N114 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
SHISA5Q8N114 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.12■□□□□ 0.97
SHISA5Q8N114 AC009086.3-201ENST00000623486 1008 ntBASIC21.12■□□□□ 0.97
SHISA5Q8N114 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHISA5Q8N114 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHISA5Q8N114 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms