Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
APLFQ8IW19 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
APLFQ8IW19 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.01■■□□□ 1.11
APLFQ8IW19 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
APLFQ8IW19 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
APLFQ8IW19 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
APLFQ8IW19 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
APLFQ8IW19 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
APLFQ8IW19 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
APLFQ8IW19 MTDHP2-201ENST00000601468 714 ntBASIC22■■□□□ 1.11
APLFQ8IW19 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22■■□□□ 1.11
APLFQ8IW19 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22■■□□□ 1.11
APLFQ8IW19 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
APLFQ8IW19 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
APLFQ8IW19 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
APLFQ8IW19 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22■■□□□ 1.11
APLFQ8IW19 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
APLFQ8IW19 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22■■□□□ 1.11
APLFQ8IW19 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
APLFQ8IW19 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
APLFQ8IW19 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.99■■□□□ 1.11
APLFQ8IW19 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
APLFQ8IW19 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.99■■□□□ 1.11
APLFQ8IW19 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
APLFQ8IW19 AL136116.3-201ENST00000402907 1138 ntBASIC21.99■■□□□ 1.11
APLFQ8IW19 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.99■■□□□ 1.11
APLFQ8IW19 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.99■■□□□ 1.11
APLFQ8IW19 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
APLFQ8IW19 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
APLFQ8IW19 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
APLFQ8IW19 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
APLFQ8IW19 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
APLFQ8IW19 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
APLFQ8IW19 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
APLFQ8IW19 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
APLFQ8IW19 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
APLFQ8IW19 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
APLFQ8IW19 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
APLFQ8IW19 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.98■■□□□ 1.11
APLFQ8IW19 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
APLFQ8IW19 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.98■■□□□ 1.11
APLFQ8IW19 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.98■■□□□ 1.11
APLFQ8IW19 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
APLFQ8IW19 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
APLFQ8IW19 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
APLFQ8IW19 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
APLFQ8IW19 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
APLFQ8IW19 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
APLFQ8IW19 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
APLFQ8IW19 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.97■■□□□ 1.11
APLFQ8IW19 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
APLFQ8IW19 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
APLFQ8IW19 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.97■■□□□ 1.11
APLFQ8IW19 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.97■■□□□ 1.11
APLFQ8IW19 AL356740.2-201ENST00000601559 647 ntBASIC21.97■■□□□ 1.11
APLFQ8IW19 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
APLFQ8IW19 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.97■■□□□ 1.11
APLFQ8IW19 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
APLFQ8IW19 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.96■■□□□ 1.11
APLFQ8IW19 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.96■■□□□ 1.11
APLFQ8IW19 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
APLFQ8IW19 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.96■■□□□ 1.11
APLFQ8IW19 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.96■■□□□ 1.11
APLFQ8IW19 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.96■■□□□ 1.11
APLFQ8IW19 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
APLFQ8IW19 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
APLFQ8IW19 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.96■■□□□ 1.11
APLFQ8IW19 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.95■■□□□ 1.11
APLFQ8IW19 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
APLFQ8IW19 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
APLFQ8IW19 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
APLFQ8IW19 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
APLFQ8IW19 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
APLFQ8IW19 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
APLFQ8IW19 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
APLFQ8IW19 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.95■■□□□ 1.1
APLFQ8IW19 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.95■■□□□ 1.1
APLFQ8IW19 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.95■■□□□ 1.1
APLFQ8IW19 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
APLFQ8IW19 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.95■■□□□ 1.1
APLFQ8IW19 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
APLFQ8IW19 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
APLFQ8IW19 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
APLFQ8IW19 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
APLFQ8IW19 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.1
APLFQ8IW19 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
APLFQ8IW19 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
APLFQ8IW19 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.94■■□□□ 1.1
APLFQ8IW19 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
APLFQ8IW19 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
APLFQ8IW19 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.94■■□□□ 1.1
APLFQ8IW19 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.94■■□□□ 1.1
APLFQ8IW19 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.94■■□□□ 1.1
APLFQ8IW19 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
APLFQ8IW19 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
APLFQ8IW19 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
APLFQ8IW19 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
APLFQ8IW19 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
APLFQ8IW19 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
APLFQ8IW19 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms