Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB43Q86YS6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RAB43Q86YS6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB43Q86YS6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB43Q86YS6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB43Q86YS6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB43Q86YS6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.25■□□□□ 0.99
RAB43Q86YS6 AC105265.2-201ENST00000467189 838 ntBASIC21.25■□□□□ 0.99
RAB43Q86YS6 AC091305.1-201ENST00000479476 895 ntBASIC21.25■□□□□ 0.99
RAB43Q86YS6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB43Q86YS6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.25■□□□□ 0.99
RAB43Q86YS6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RAB43Q86YS6 AL136967.2-201ENST00000623968 743 ntBASIC21.25■□□□□ 0.99
RAB43Q86YS6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RAB43Q86YS6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB43Q86YS6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB43Q86YS6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RAB43Q86YS6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB43Q86YS6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RAB43Q86YS6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB43Q86YS6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.24■□□□□ 0.99
RAB43Q86YS6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.24■□□□□ 0.99
RAB43Q86YS6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.24■□□□□ 0.99
RAB43Q86YS6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.24■□□□□ 0.99
RAB43Q86YS6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB43Q86YS6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RAB43Q86YS6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB43Q86YS6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB43Q86YS6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.24■□□□□ 0.99
RAB43Q86YS6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB43Q86YS6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.23■□□□□ 0.99
RAB43Q86YS6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB43Q86YS6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB43Q86YS6 RARRES2P6-201ENST00000567333 442 ntBASIC21.23■□□□□ 0.99
RAB43Q86YS6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RAB43Q86YS6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RAB43Q86YS6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RAB43Q86YS6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.23■□□□□ 0.99
RAB43Q86YS6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB43Q86YS6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB43Q86YS6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB43Q86YS6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB43Q86YS6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB43Q86YS6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB43Q86YS6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.22■□□□□ 0.99
RAB43Q86YS6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB43Q86YS6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB43Q86YS6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB43Q86YS6 HLA-L-211ENST00000482052 1765 ntBASIC21.22■□□□□ 0.99
RAB43Q86YS6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.22■□□□□ 0.99
RAB43Q86YS6 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAB43Q86YS6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB43Q86YS6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
RAB43Q86YS6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB43Q86YS6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB43Q86YS6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB43Q86YS6 AC027682.1-201ENST00000562846 899 ntBASIC21.21■□□□□ 0.99
RAB43Q86YS6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAB43Q86YS6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB43Q86YS6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB43Q86YS6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.21■□□□□ 0.99
RAB43Q86YS6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAB43Q86YS6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB43Q86YS6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB43Q86YS6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB43Q86YS6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.2■□□□□ 0.98
RAB43Q86YS6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.2■□□□□ 0.98
RAB43Q86YS6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RAB43Q86YS6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.2■□□□□ 0.98
RAB43Q86YS6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.2■□□□□ 0.98
RAB43Q86YS6 AC009086.3-201ENST00000623486 1008 ntBASIC21.2■□□□□ 0.98
RAB43Q86YS6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB43Q86YS6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RAB43Q86YS6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
RAB43Q86YS6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB43Q86YS6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB43Q86YS6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB43Q86YS6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB43Q86YS6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAB43Q86YS6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB43Q86YS6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB43Q86YS6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB43Q86YS6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB43Q86YS6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB43Q86YS6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAB43Q86YS6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.19■□□□□ 0.98
RAB43Q86YS6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RAB43Q86YS6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB43Q86YS6 RASA4CP-201ENST00000424092 1398 ntBASIC21.19■□□□□ 0.98
RAB43Q86YS6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.19■□□□□ 0.98
RAB43Q86YS6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAB43Q86YS6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB43Q86YS6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.18■□□□□ 0.98
RAB43Q86YS6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.18■□□□□ 0.98
RAB43Q86YS6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB43Q86YS6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB43Q86YS6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB43Q86YS6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAB43Q86YS6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB43Q86YS6 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms