Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.36■■□□□ 1.01
RETREG3Q86VR2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG3Q86VR2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.36■■□□□ 1.01
RETREG3Q86VR2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG3Q86VR2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG3Q86VR2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.36■■□□□ 1.01
RETREG3Q86VR2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.36■■□□□ 1.01
RETREG3Q86VR2 U85056.1-201ENST00000616429 682 ntBASIC21.36■■□□□ 1.01
RETREG3Q86VR2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG3Q86VR2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG3Q86VR2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG3Q86VR2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
RETREG3Q86VR2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RETREG3Q86VR2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.36■■□□□ 1.01
RETREG3Q86VR2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.35■■□□□ 1.01
RETREG3Q86VR2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG3Q86VR2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG3Q86VR2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG3Q86VR2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG3Q86VR2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG3Q86VR2 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.35■■□□□ 1.01
RETREG3Q86VR2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG3Q86VR2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.35■■□□□ 1.01
RETREG3Q86VR2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.35■■□□□ 1.01
RETREG3Q86VR2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.35■■□□□ 1.01
RETREG3Q86VR2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG3Q86VR2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG3Q86VR2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.35■■□□□ 1.01
RETREG3Q86VR2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.35■■□□□ 1.01
RETREG3Q86VR2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG3Q86VR2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG3Q86VR2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG3Q86VR2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RETREG3Q86VR2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
RETREG3Q86VR2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG3Q86VR2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG3Q86VR2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RETREG3Q86VR2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.34■■□□□ 1.01
RETREG3Q86VR2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RETREG3Q86VR2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG3Q86VR2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.34■■□□□ 1.01
RETREG3Q86VR2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.34■■□□□ 1.01
RETREG3Q86VR2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.34■■□□□ 1.01
RETREG3Q86VR2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG3Q86VR2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG3Q86VR2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG3Q86VR2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG3Q86VR2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
RETREG3Q86VR2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RETREG3Q86VR2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RETREG3Q86VR2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.33■■□□□ 1
RETREG3Q86VR2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.33■■□□□ 1
RETREG3Q86VR2 AL353803.4-201ENST00000565882 1934 ntBASIC21.33■■□□□ 1
RETREG3Q86VR2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RETREG3Q86VR2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RETREG3Q86VR2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.32■■□□□ 1
RETREG3Q86VR2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RETREG3Q86VR2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.32■■□□□ 1
RETREG3Q86VR2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.32■■□□□ 1
RETREG3Q86VR2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG3Q86VR2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG3Q86VR2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.32■■□□□ 1
RETREG3Q86VR2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG3Q86VR2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG3Q86VR2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG3Q86VR2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG3Q86VR2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG3Q86VR2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RETREG3Q86VR2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RETREG3Q86VR2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.31■■□□□ 1
RETREG3Q86VR2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RETREG3Q86VR2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RETREG3Q86VR2 AL137060.1-201ENST00000618151 2648 ntBASIC21.31■■□□□ 1
RETREG3Q86VR2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RETREG3Q86VR2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.31■■□□□ 1
RETREG3Q86VR2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RETREG3Q86VR2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG3Q86VR2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG3Q86VR2 AC080038.3-201ENST00000623346 1952 ntBASIC21.3■■□□□ 1
RETREG3Q86VR2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.3■■□□□ 1
RETREG3Q86VR2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RETREG3Q86VR2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG3Q86VR2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RETREG3Q86VR2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RETREG3Q86VR2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG3Q86VR2 AF131216.4-201ENST00000638924 1588 ntBASIC21.3■■□□□ 1
RETREG3Q86VR2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.3■■□□□ 1
RETREG3Q86VR2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RETREG3Q86VR2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RETREG3Q86VR2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RETREG3Q86VR2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.29■■□□□ 1
RETREG3Q86VR2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
RETREG3Q86VR2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.29■■□□□ 1
RETREG3Q86VR2 KRT18P60-201ENST00000312876 1297 ntBASIC21.29■■□□□ 1
RETREG3Q86VR2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.29■■□□□ 1
RETREG3Q86VR2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RETREG3Q86VR2 AC019171.1-201ENST00000601251 1056 ntBASIC21.29■■□□□ 1
RETREG3Q86VR2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RETREG3Q86VR2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.29■■□□□ 1
RETREG3Q86VR2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms