Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CTR9Q6PD62 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.67■■□□□ 1.86
CTR9Q6PD62 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CTR9Q6PD62 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CTR9Q6PD62 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CTR9Q6PD62 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CTR9Q6PD62 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.66■■□□□ 1.86
CTR9Q6PD62 pRNA.6-201ENST00000610482 90 ntBASIC26.66■■□□□ 1.86
CTR9Q6PD62 pRNA.5-201ENST00000612139 90 ntBASIC26.66■■□□□ 1.86
CTR9Q6PD62 pRNA.11-201ENST00000618423 90 ntBASIC26.66■■□□□ 1.86
CTR9Q6PD62 pRNA.13-201ENST00000619112 90 ntBASIC26.66■■□□□ 1.86
CTR9Q6PD62 AL355001.2-201ENST00000620617 1191 ntBASIC26.66■■□□□ 1.86
CTR9Q6PD62 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.66■■□□□ 1.86
CTR9Q6PD62 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.66■■□□□ 1.86
CTR9Q6PD62 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CTR9Q6PD62 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CTR9Q6PD62 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CTR9Q6PD62 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CTR9Q6PD62 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
CTR9Q6PD62 AC144652.1-201ENST00000609974 1624 ntBASIC26.65■■□□□ 1.86
CTR9Q6PD62 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CTR9Q6PD62 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.65■■□□□ 1.86
CTR9Q6PD62 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.65■■□□□ 1.86
CTR9Q6PD62 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.65■■□□□ 1.86
CTR9Q6PD62 FP325331.1-202ENST00000623531 1380 ntBASIC26.65■■□□□ 1.86
CTR9Q6PD62 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CTR9Q6PD62 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CTR9Q6PD62 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CTR9Q6PD62 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CTR9Q6PD62 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CTR9Q6PD62 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
CTR9Q6PD62 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
CTR9Q6PD62 AL136967.2-201ENST00000623968 743 ntBASIC26.64■■□□□ 1.86
CTR9Q6PD62 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.64■■□□□ 1.86
CTR9Q6PD62 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CTR9Q6PD62 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.64■■□□□ 1.85
CTR9Q6PD62 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.63■■□□□ 1.85
CTR9Q6PD62 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CTR9Q6PD62 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CTR9Q6PD62 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CTR9Q6PD62 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CTR9Q6PD62 AC142381.2-201ENST00000566120 298 ntBASIC26.63■■□□□ 1.85
CTR9Q6PD62 AC136469.2-201ENST00000623944 1028 ntBASIC26.63■■□□□ 1.85
CTR9Q6PD62 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.63■■□□□ 1.85
CTR9Q6PD62 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CTR9Q6PD62 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CTR9Q6PD62 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CTR9Q6PD62 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.62■■□□□ 1.85
CTR9Q6PD62 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.62■■□□□ 1.85
CTR9Q6PD62 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CTR9Q6PD62 DUX4L4-201ENST00000566884 1269 ntBASIC26.62■■□□□ 1.85
CTR9Q6PD62 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.62■■□□□ 1.85
CTR9Q6PD62 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CTR9Q6PD62 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CTR9Q6PD62 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CTR9Q6PD62 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CTR9Q6PD62 AC079630.1-202ENST00000618127 1840 ntBASIC26.61■■□□□ 1.85
CTR9Q6PD62 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CTR9Q6PD62 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CTR9Q6PD62 AP001330.3-201ENST00000520123 633 ntBASIC26.61■■□□□ 1.85
CTR9Q6PD62 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.6■■□□□ 1.85
CTR9Q6PD62 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.6■■□□□ 1.85
CTR9Q6PD62 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
CTR9Q6PD62 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CTR9Q6PD62 MIR939-201ENST00000401314 82 ntBASIC26.6■■□□□ 1.85
CTR9Q6PD62 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.6■■□□□ 1.85
CTR9Q6PD62 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.6■■□□□ 1.85
CTR9Q6PD62 AF213884.3-201ENST00000563833 479 ntBASIC26.6■■□□□ 1.85
CTR9Q6PD62 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.6■■□□□ 1.85
CTR9Q6PD62 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
CTR9Q6PD62 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
CTR9Q6PD62 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CTR9Q6PD62 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
CTR9Q6PD62 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.6■■□□□ 1.85
CTR9Q6PD62 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.59■■□□□ 1.85
CTR9Q6PD62 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CTR9Q6PD62 LINC01529-204ENST00000636474 1715 ntBASIC26.59■■□□□ 1.85
CTR9Q6PD62 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CTR9Q6PD62 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CTR9Q6PD62 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CTR9Q6PD62 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.59■■□□□ 1.85
CTR9Q6PD62 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CTR9Q6PD62 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.59■■□□□ 1.85
CTR9Q6PD62 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.59■■□□□ 1.85
CTR9Q6PD62 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.59■■□□□ 1.85
CTR9Q6PD62 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CTR9Q6PD62 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
CTR9Q6PD62 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CTR9Q6PD62 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CTR9Q6PD62 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CTR9Q6PD62 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
CTR9Q6PD62 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CTR9Q6PD62 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
CTR9Q6PD62 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CTR9Q6PD62 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CTR9Q6PD62 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
CTR9Q6PD62 AL499627.2-201ENST00000606283 725 ntBASIC26.58■■□□□ 1.85
CTR9Q6PD62 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
CTR9Q6PD62 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
CTR9Q6PD62 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms