Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL54Q6P161 AC073130.3-201ENST00000624389 2278 ntBASIC16.89■□□□□ 0.29
MRPL54Q6P161 C11orf96-202ENST00000528572 1834 ntBASIC16.89■□□□□ 0.29
MRPL54Q6P161 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
MRPL54Q6P161 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.89■□□□□ 0.29
MRPL54Q6P161 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL54Q6P161 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL54Q6P161 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MRPL54Q6P161 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL54Q6P161 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.88■□□□□ 0.29
MRPL54Q6P161 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.88■□□□□ 0.29
MRPL54Q6P161 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL54Q6P161 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL54Q6P161 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL54Q6P161 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL54Q6P161 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL54Q6P161 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL54Q6P161 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL54Q6P161 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.87■□□□□ 0.29
MRPL54Q6P161 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.87■□□□□ 0.29
MRPL54Q6P161 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL54Q6P161 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL54Q6P161 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
MRPL54Q6P161 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.87■□□□□ 0.29
MRPL54Q6P161 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL54Q6P161 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
MRPL54Q6P161 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.86■□□□□ 0.29
MRPL54Q6P161 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPL54Q6P161 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPL54Q6P161 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPL54Q6P161 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
MRPL54Q6P161 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPL54Q6P161 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.86■□□□□ 0.29
MRPL54Q6P161 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
MRPL54Q6P161 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MRPL54Q6P161 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.85■□□□□ 0.29
MRPL54Q6P161 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL54Q6P161 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL54Q6P161 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL54Q6P161 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL54Q6P161 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
MRPL54Q6P161 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL54Q6P161 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL54Q6P161 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.85■□□□□ 0.29
MRPL54Q6P161 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL54Q6P161 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL54Q6P161 AC092053.2-201ENST00000640557 1818 ntBASIC16.85■□□□□ 0.29
MRPL54Q6P161 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL54Q6P161 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL54Q6P161 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
MRPL54Q6P161 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL54Q6P161 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL54Q6P161 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MRPL54Q6P161 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
MRPL54Q6P161 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MRPL54Q6P161 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.85■□□□□ 0.29
MRPL54Q6P161 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
MRPL54Q6P161 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL54Q6P161 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL54Q6P161 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
MRPL54Q6P161 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
MRPL54Q6P161 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.84■□□□□ 0.29
MRPL54Q6P161 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL54Q6P161 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.84■□□□□ 0.29
MRPL54Q6P161 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
MRPL54Q6P161 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MRPL54Q6P161 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MRPL54Q6P161 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
MRPL54Q6P161 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
MRPL54Q6P161 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL54Q6P161 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.84■□□□□ 0.29
MRPL54Q6P161 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL54Q6P161 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRPL54Q6P161 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.84■□□□□ 0.29
MRPL54Q6P161 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.84■□□□□ 0.29
MRPL54Q6P161 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRPL54Q6P161 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRPL54Q6P161 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRPL54Q6P161 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRPL54Q6P161 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRPL54Q6P161 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRPL54Q6P161 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MRPL54Q6P161 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.83■□□□□ 0.28
MRPL54Q6P161 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.83■□□□□ 0.28
MRPL54Q6P161 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.83■□□□□ 0.28
MRPL54Q6P161 AC087741.3-201ENST00000624270 1347 ntBASIC16.83■□□□□ 0.28
MRPL54Q6P161 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.83■□□□□ 0.28
MRPL54Q6P161 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.83■□□□□ 0.28
MRPL54Q6P161 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.82■□□□□ 0.28
MRPL54Q6P161 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.82■□□□□ 0.28
MRPL54Q6P161 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.82■□□□□ 0.28
MRPL54Q6P161 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MRPL54Q6P161 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPL54Q6P161 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPL54Q6P161 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.82■□□□□ 0.28
MRPL54Q6P161 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRPL54Q6P161 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.82■□□□□ 0.28
MRPL54Q6P161 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MRPL54Q6P161 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.82■□□□□ 0.28
MRPL54Q6P161 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms