Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RNF213Q63HN8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC12.24□□□□□ -0.45
RNF213Q63HN8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF213Q63HN8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
RNF213Q63HN8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF213Q63HN8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RNF213Q63HN8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF213Q63HN8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RNF213Q63HN8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF213Q63HN8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
RNF213Q63HN8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC12.23□□□□□ -0.45
RNF213Q63HN8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RNF213Q63HN8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF213Q63HN8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
RNF213Q63HN8 RARRES2P4-201ENST00000514074 484 ntBASIC12.23□□□□□ -0.45
RNF213Q63HN8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC12.23□□□□□ -0.45
RNF213Q63HN8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RNF213Q63HN8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC12.23□□□□□ -0.45
RNF213Q63HN8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
RNF213Q63HN8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC12.23□□□□□ -0.45
RNF213Q63HN8 MFSD11-216ENST00000590393 1141 ntBASIC12.23□□□□□ -0.45
RNF213Q63HN8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.23□□□□□ -0.45
RNF213Q63HN8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF213Q63HN8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RNF213Q63HN8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC12.22□□□□□ -0.45
RNF213Q63HN8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RNF213Q63HN8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
RNF213Q63HN8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RNF213Q63HN8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC12.22□□□□□ -0.45
RNF213Q63HN8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF213Q63HN8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.22□□□□□ -0.45
RNF213Q63HN8 RNA5SP413-201ENST00000516373 109 ntBASIC12.22□□□□□ -0.45
RNF213Q63HN8 AF201337.1-201ENST00000520239 748 ntBASIC12.22□□□□□ -0.45
RNF213Q63HN8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF213Q63HN8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RNF213Q63HN8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
RNF213Q63HN8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RNF213Q63HN8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
RNF213Q63HN8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.21□□□□□ -0.45
RNF213Q63HN8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC12.21□□□□□ -0.45
RNF213Q63HN8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC12.21□□□□□ -0.45
RNF213Q63HN8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC12.21□□□□□ -0.45
RNF213Q63HN8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
RNF213Q63HN8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RNF213Q63HN8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RNF213Q63HN8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RNF213Q63HN8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RNF213Q63HN8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF213Q63HN8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RNF213Q63HN8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RNF213Q63HN8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.21□□□□□ -0.46
RNF213Q63HN8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
RNF213Q63HN8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RNF213Q63HN8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC12.21□□□□□ -0.46
RNF213Q63HN8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC12.21□□□□□ -0.46
RNF213Q63HN8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RNF213Q63HN8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF213Q63HN8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
RNF213Q63HN8 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.2□□□□□ -0.46
RNF213Q63HN8 AC073648.6-201ENST00000641589 218 ntBASIC12.2□□□□□ -0.46
RNF213Q63HN8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
RNF213Q63HN8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.2□□□□□ -0.46
RNF213Q63HN8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RNF213Q63HN8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC12.2□□□□□ -0.46
RNF213Q63HN8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
RNF213Q63HN8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF213Q63HN8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF213Q63HN8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC12.2□□□□□ -0.46
RNF213Q63HN8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RNF213Q63HN8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC12.19□□□□□ -0.46
RNF213Q63HN8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.19□□□□□ -0.46
RNF213Q63HN8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.19□□□□□ -0.46
RNF213Q63HN8 MARS-234ENST00000630571 216 ntTSL 5 BASIC12.19□□□□□ -0.46
RNF213Q63HN8 MARS-235ENST00000630803 183 ntTSL 3 BASIC12.19□□□□□ -0.46
RNF213Q63HN8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RNF213Q63HN8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RNF213Q63HN8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC12.19□□□□□ -0.46
RNF213Q63HN8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC12.19□□□□□ -0.46
RNF213Q63HN8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RNF213Q63HN8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RNF213Q63HN8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC12.19□□□□□ -0.46
RNF213Q63HN8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.19□□□□□ -0.46
RNF213Q63HN8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC12.19□□□□□ -0.46
RNF213Q63HN8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC12.19□□□□□ -0.46
RNF213Q63HN8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
RNF213Q63HN8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC12.19□□□□□ -0.46
RNF213Q63HN8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC12.19□□□□□ -0.46
RNF213Q63HN8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RNF213Q63HN8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RNF213Q63HN8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
RNF213Q63HN8 FP325331.1-202ENST00000623531 1380 ntBASIC12.18□□□□□ -0.46
RNF213Q63HN8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RNF213Q63HN8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC12.18□□□□□ -0.46
RNF213Q63HN8 KRT19P1-201ENST00000405746 1186 ntBASIC12.18□□□□□ -0.46
RNF213Q63HN8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RNF213Q63HN8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RNF213Q63HN8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.18□□□□□ -0.46
RNF213Q63HN8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.18□□□□□ -0.46
RNF213Q63HN8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
RNF213Q63HN8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms