Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 ARC40YBR234C 1155 nt4.41□□□□□ -1.7
DDC1Q08949 UBP7YIL156W 3216 nt4.41□□□□□ -1.7
DDC1Q08949 IMA3YIL172C 1770 nt4.4□□□□□ -1.7
DDC1Q08949 IMA4YJL221C 1770 nt4.4□□□□□ -1.7
DDC1Q08949 BRE4YDL231C 3378 nt4.4□□□□□ -1.7
DDC1Q08949 TMA17YDL110C 453 nt4.4□□□□□ -1.71
DDC1Q08949 SNM1YDR478W 597 nt4.4□□□□□ -1.71
DDC1Q08949 tK(CUU)CtK(CUU)C 73 nt4.4□□□□□ -1.71
DDC1Q08949 tK(CUU)D1tK(CUU)D1 73 nt4.4□□□□□ -1.71
DDC1Q08949 tK(CUU)D2tK(CUU)D2 73 nt4.4□□□□□ -1.71
DDC1Q08949 tK(CUU)E1tK(CUU)E1 73 nt4.4□□□□□ -1.71
DDC1Q08949 tK(CUU)E2tK(CUU)E2 73 nt4.4□□□□□ -1.71
DDC1Q08949 tK(CUU)FtK(CUU)F 73 nt4.4□□□□□ -1.71
DDC1Q08949 tK(CUU)G1tK(CUU)G1 73 nt4.4□□□□□ -1.71
DDC1Q08949 tK(CUU)G2tK(CUU)G2 73 nt4.4□□□□□ -1.71
DDC1Q08949 tK(CUU)G3tK(CUU)G3 73 nt4.4□□□□□ -1.71
DDC1Q08949 tK(CUU)ItK(CUU)I 73 nt4.4□□□□□ -1.71
DDC1Q08949 tK(CUU)JtK(CUU)J 73 nt4.4□□□□□ -1.71
DDC1Q08949 tK(CUU)KtK(CUU)K 73 nt4.4□□□□□ -1.71
DDC1Q08949 tK(CUU)MtK(CUU)M 73 nt4.4□□□□□ -1.71
DDC1Q08949 tK(CUU)PtK(CUU)P 73 nt4.4□□□□□ -1.71
DDC1Q08949 RFU1YLR073C 603 nt4.4□□□□□ -1.71
DDC1Q08949 IMP2YMR035W 534 nt4.4□□□□□ -1.71
DDC1Q08949 YIM1YMR152W 1098 nt4.4□□□□□ -1.71
DDC1Q08949 YOL079WYOL079W 399 nt4.4□□□□□ -1.71
DDC1Q08949 PRE2YPR103W 864 nt4.4□□□□□ -1.71
DDC1Q08949 MET3YJR010W 1536 nt4.4□□□□□ -1.71
DDC1Q08949 STB2YMR053C 2553 nt4.4□□□□□ -1.71
DDC1Q08949 HIS4YCL030C 2400 nt4.4□□□□□ -1.71
DDC1Q08949 SSB1YDL229W 1842 nt4.39□□□□□ -1.71
DDC1Q08949 PFK1YGR240C 2964 nt4.39□□□□□ -1.71
DDC1Q08949 PER1YCR044C 1074 nt4.39□□□□□ -1.71
DDC1Q08949 API2YDR525W 330 nt4.39□□□□□ -1.71
DDC1Q08949 YLR407WYLR407W 687 nt4.39□□□□□ -1.71
DDC1Q08949 TFC7YOR110W 1308 nt4.39□□□□□ -1.71
DDC1Q08949 HOM3YER052C 1584 nt4.39□□□□□ -1.71
DDC1Q08949 PGM2YMR105C 1710 nt4.38□□□□□ -1.71
DDC1Q08949 RPC53YDL150W 1269 nt4.38□□□□□ -1.71
DDC1Q08949 DPB4YDR121W 591 nt4.38□□□□□ -1.71
DDC1Q08949 YKR104WYKR104W 921 nt4.38□□□□□ -1.71
DDC1Q08949 YOR131CYOR131C 657 nt4.38□□□□□ -1.71
DDC1Q08949 CBP1YJL209W 1965 nt4.38□□□□□ -1.71
DDC1Q08949 RAD52YML032C 1416 nt4.38□□□□□ -1.71
DDC1Q08949 BUD25YER014C-A 462 nt4.37□□□□□ -1.71
DDC1Q08949 AAD6YFL056C 639 nt4.37□□□□□ -1.71
DDC1Q08949 BUD13YGL174W 801 nt4.37□□□□□ -1.71
DDC1Q08949 YGR011WYGR011W 327 nt4.37□□□□□ -1.71
DDC1Q08949 MIC26YGR235C 702 nt4.37□□□□□ -1.71
DDC1Q08949 YIL028WYIL028W 399 nt4.37□□□□□ -1.71
DDC1Q08949 MRS3YJL133W 945 nt4.37□□□□□ -1.71
DDC1Q08949 PAU17YLL025W 375 nt4.37□□□□□ -1.71
DDC1Q08949 CDC42YLR229C 576 nt4.37□□□□□ -1.71
DDC1Q08949 MRPL3YMR024W 1173 nt4.37□□□□□ -1.71
DDC1Q08949 YMR086C-AYMR086C-A 339 nt4.37□□□□□ -1.71
DDC1Q08949 AST1YBL069W 1290 nt4.37□□□□□ -1.71
DDC1Q08949 NOP13YNL175C 1212 nt4.37□□□□□ -1.71
DDC1Q08949 YPL014WYPL014W 1146 nt4.37□□□□□ -1.71
DDC1Q08949 COA2YPL189C-A 207 nt4.37□□□□□ -1.71
DDC1Q08949 GSH2YOL049W 1476 nt4.37□□□□□ -1.71
DDC1Q08949 NUP2YLR335W 2163 nt4.36□□□□□ -1.71
DDC1Q08949 MNN1YER001W 2289 nt4.36□□□□□ -1.71
DDC1Q08949 ARC1YGL105W 1131 nt4.36□□□□□ -1.71
DDC1Q08949 YIL171WYIL171W 330 nt4.36□□□□□ -1.71
DDC1Q08949 SPC34YKR037C 888 nt4.36□□□□□ -1.71
DDC1Q08949 TVP38YKR088C 1014 nt4.36□□□□□ -1.71
DDC1Q08949 SMP1YBR182C 1359 nt4.36□□□□□ -1.71
DDC1Q08949 APM1YPL259C 1428 nt4.36□□□□□ -1.71
DDC1Q08949 PRM7YDL039C 2097 nt4.36□□□□□ -1.71
DDC1Q08949 TDA11YHR159W 1515 nt4.36□□□□□ -1.71
DDC1Q08949 GPP1YIL053W 753 nt4.35□□□□□ -1.71
DDC1Q08949 EFB1YAL003W 621 nt4.35□□□□□ -1.71
DDC1Q08949 TEF4YKL081W 1239 nt4.35□□□□□ -1.71
DDC1Q08949 COG5YNL051W 1212 nt4.35□□□□□ -1.71
DDC1Q08949 TRM11YOL124C 1302 nt4.35□□□□□ -1.71
DDC1Q08949 MUM3YOR298W 1440 nt4.35□□□□□ -1.71
DDC1Q08949 MAD3YJL013C 1548 nt4.35□□□□□ -1.71
DDC1Q08949 IXR1YKL032C 1794 nt4.35□□□□□ -1.71
DDC1Q08949 YDR246W-AYDR246W-A 201 nt4.34□□□□□ -1.71
DDC1Q08949 SPO12YHR152W 522 nt4.34□□□□□ -1.71
DDC1Q08949 MRPL20YKR085C 588 nt4.34□□□□□ -1.71
DDC1Q08949 REG2YBR050C 1017 nt4.34□□□□□ -1.71
DDC1Q08949 PEX29YDR479C 1665 nt4.34□□□□□ -1.71
DDC1Q08949 MET4YNL103W 2019 nt4.34□□□□□ -1.71
DDC1Q08949 FLC1YPL221W 2382 nt4.34□□□□□ -1.72
DDC1Q08949 HUL4YJR036C 2679 nt4.33□□□□□ -1.72
DDC1Q08949 TRE1YPL176C 2352 nt4.33□□□□□ -1.72
DDC1Q08949 GRC3YLL035W 1899 nt4.33□□□□□ -1.72
DDC1Q08949 YDL228CYDL228C 642 nt4.33□□□□□ -1.72
DDC1Q08949 DCV1YFR012W 609 nt4.33□□□□□ -1.72
DDC1Q08949 tQ(UUG)CtQ(UUG)C 72 nt4.33□□□□□ -1.72
DDC1Q08949 tQ(UUG)D1tQ(UUG)D1 72 nt4.33□□□□□ -1.72
DDC1Q08949 tQ(UUG)D2tQ(UUG)D2 72 nt4.33□□□□□ -1.72
DDC1Q08949 tQ(UUG)D3tQ(UUG)D3 72 nt4.33□□□□□ -1.72
DDC1Q08949 tQ(UUG)E1tQ(UUG)E1 72 nt4.33□□□□□ -1.72
DDC1Q08949 tQ(UUG)HtQ(UUG)H 72 nt4.33□□□□□ -1.72
DDC1Q08949 tQ(UUG)LtQ(UUG)L 72 nt4.33□□□□□ -1.72
DDC1Q08949 NVJ1YHR195W 966 nt4.33□□□□□ -1.72
DDC1Q08949 MDM12YOL009C 816 nt4.33□□□□□ -1.72
DDC1Q08949 SUA7YPR086W 1038 nt4.33□□□□□ -1.72
DDC1Q08949 snR3snR3 194 nt4.33□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 23.6 ms