Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 GLN4YOR168W 2430 nt3.66□□□□□ -1.82
HRD1Q08109 YMR221CYMR221C 1515 nt3.66□□□□□ -1.82
HRD1Q08109 SAT4YCR008W 1812 nt3.66□□□□□ -1.82
HRD1Q08109 RRP45YDR280W 918 nt3.66□□□□□ -1.82
HRD1Q08109 YER145C-AYER145C-A 438 nt3.66□□□□□ -1.82
HRD1Q08109 YPL025CYPL025C 558 nt3.66□□□□□ -1.82
HRD1Q08109 TYW1YPL207W 2433 nt3.66□□□□□ -1.82
HRD1Q08109 NOP58YOR310C 1536 nt3.65□□□□□ -1.82
HRD1Q08109 BUD13YGL174W 801 nt3.65□□□□□ -1.83
HRD1Q08109 SAE3YHR079C-A 276 nt3.65□□□□□ -1.83
HRD1Q08109 REV7YIL139C 738 nt3.65□□□□□ -1.83
HRD1Q08109 CYC1YJR048W 330 nt3.65□□□□□ -1.83
HRD1Q08109 YRA2YKL214C 612 nt3.65□□□□□ -1.83
HRD1Q08109 CIN5YOR028C 888 nt3.65□□□□□ -1.83
HRD1Q08109 YDC1YPL087W 954 nt3.65□□□□□ -1.83
HRD1Q08109 SUA7YPR086W 1038 nt3.65□□□□□ -1.83
HRD1Q08109 KIP3YGL216W 2418 nt3.65□□□□□ -1.83
HRD1Q08109 YPR003CYPR003C 2265 nt3.64□□□□□ -1.83
HRD1Q08109 YDR056CYDR056C 618 nt3.64□□□□□ -1.83
HRD1Q08109 CBT1YKL208W 816 nt3.64□□□□□ -1.83
HRD1Q08109 YAR030CYAR030C 342 nt3.64□□□□□ -1.83
HRD1Q08109 PNP1YLR209C 936 nt3.64□□□□□ -1.83
HRD1Q08109 NMA1YLR328W 1206 nt3.64□□□□□ -1.83
HRD1Q08109 ECM2YBR065C 1095 nt3.64□□□□□ -1.83
HRD1Q08109 CDC14YFR028C 1656 nt3.64□□□□□ -1.83
HRD1Q08109 WTM1YOR230W 1314 nt3.64□□□□□ -1.83
HRD1Q08109 SSH4YKL124W 1740 nt3.64□□□□□ -1.83
HRD1Q08109 PRP9YDL030W 1593 nt3.63□□□□□ -1.83
HRD1Q08109 DBP3YGL078C 1572 nt3.63□□□□□ -1.83
HRD1Q08109 IXR1YKL032C 1794 nt3.63□□□□□ -1.83
HRD1Q08109 YCR023CYCR023C 1836 nt3.63□□□□□ -1.83
HRD1Q08109 TDA6YPR157W 1404 nt3.63□□□□□ -1.83
HRD1Q08109 ATM1YMR301C 2073 nt3.63□□□□□ -1.83
HRD1Q08109 RPO21YDL140C 5202 nt3.63□□□□□ -1.83
HRD1Q08109 YHR214WYHR214W 612 nt3.63□□□□□ -1.83
HRD1Q08109 YAR066WYAR066W 612 nt3.63□□□□□ -1.83
HRD1Q08109 MAC1YMR021C 1254 nt3.63□□□□□ -1.83
HRD1Q08109 YPL114WYPL114W 420 nt3.63□□□□□ -1.83
HRD1Q08109 MNL1YHR204W 2391 nt3.63□□□□□ -1.83
HRD1Q08109 MLF3YNL074C 1359 nt3.63□□□□□ -1.83
HRD1Q08109 DIT1YDR403W 1611 nt3.62□□□□□ -1.83
HRD1Q08109 MNN4YKL201C 3537 nt3.62□□□□□ -1.83
HRD1Q08109 FAA1YOR317W 2103 nt3.62□□□□□ -1.83
HRD1Q08109 RAD52YML032C 1416 nt3.62□□□□□ -1.83
HRD1Q08109 RIA1YNL163C 3333 nt3.62□□□□□ -1.83
HRD1Q08109 FMP30YPL103C 1407 nt3.62□□□□□ -1.83
HRD1Q08109 COX2Q0250 756 nt3.62□□□□□ -1.83
HRD1Q08109 YNL217WYNL217W 981 nt3.62□□□□□ -1.83
HRD1Q08109 SPO19YPL130W 672 nt3.62□□□□□ -1.83
HRD1Q08109 UBA3YPR066W 900 nt3.62□□□□□ -1.83
HRD1Q08109 MRE11YMR224C 2079 nt3.62□□□□□ -1.83
HRD1Q08109 SRO7YPR032W 3102 nt3.62□□□□□ -1.83
HRD1Q08109 PIM1YBL022C 3402 nt3.61□□□□□ -1.83
HRD1Q08109 YER077CYER077C 2067 nt3.61□□□□□ -1.83
HRD1Q08109 YGL188CYGL188C 174 nt3.61□□□□□ -1.83
HRD1Q08109 tR(ACG)JtR(ACG)J 73 nt3.61□□□□□ -1.83
HRD1Q08109 NHX1YDR456W 1902 nt3.6□□□□□ -1.83
HRD1Q08109 YDL094CYDL094C 510 nt3.6□□□□□ -1.83
HRD1Q08109 HSP31YDR533C 714 nt3.6□□□□□ -1.83
HRD1Q08109 BNA6YFR047C 888 nt3.6□□□□□ -1.83
HRD1Q08109 LOH1YJL038C 660 nt3.6□□□□□ -1.83
HRD1Q08109 OAR1YKL055C 837 nt3.6□□□□□ -1.83
HRD1Q08109 SWC7YLR385C 399 nt3.6□□□□□ -1.83
HRD1Q08109 GTR1YML121W 933 nt3.6□□□□□ -1.83
HRD1Q08109 TOM40YMR203W 1164 nt3.6□□□□□ -1.83
HRD1Q08109 HOYDL227C 1761 nt3.6□□□□□ -1.83
HRD1Q08109 SVF1YDR346C 1446 nt3.6□□□□□ -1.83
HRD1Q08109 PEX30YLR324W 1572 nt3.59□□□□□ -1.83
HRD1Q08109 PTR2YKR093W 1806 nt3.59□□□□□ -1.83
HRD1Q08109 SPR6YER115C 576 nt3.59□□□□□ -1.83
HRD1Q08109 RPL24AYGL031C 468 nt3.59□□□□□ -1.83
HRD1Q08109 IRC9YJL142C 393 nt3.59□□□□□ -1.83
HRD1Q08109 IES3YLR052W 753 nt3.59□□□□□ -1.83
HRD1Q08109 YNL296WYNL296W 315 nt3.59□□□□□ -1.83
HRD1Q08109 YOR292CYOR292C 930 nt3.59□□□□□ -1.83
HRD1Q08109 SET6YPL165C 1122 nt3.59□□□□□ -1.83
HRD1Q08109 snR3snR3 194 nt3.59□□□□□ -1.83
HRD1Q08109 IML2YJL082W 2196 nt3.59□□□□□ -1.84
HRD1Q08109 YIL001WYIL001W 1542 nt3.59□□□□□ -1.84
HRD1Q08109 SEG1YMR086W 2883 nt3.58□□□□□ -1.84
HRD1Q08109 RIM4YHL024W 2142 nt3.58□□□□□ -1.84
HRD1Q08109 RPO31YOR116C 4383 nt3.58□□□□□ -1.84
HRD1Q08109 SPO73YER046W 432 nt3.58□□□□□ -1.84
HRD1Q08109 CIA2YHR122W 696 nt3.58□□□□□ -1.84
HRD1Q08109 YIL171WYIL171W 330 nt3.58□□□□□ -1.84
HRD1Q08109 ELF1YKL160W 438 nt3.58□□□□□ -1.84
HRD1Q08109 YOR034C-AYOR034C-A 243 nt3.58□□□□□ -1.84
HRD1Q08109 ECM23YPL021W 564 nt3.58□□□□□ -1.84
HRD1Q08109 MGR2YPL098C 342 nt3.58□□□□□ -1.84
HRD1Q08109 HAL1YPR005C 885 nt3.58□□□□□ -1.84
HRD1Q08109 RPG1YBR079C 2895 nt3.58□□□□□ -1.84
HRD1Q08109 APM4YOL062C 1476 nt3.58□□□□□ -1.84
HRD1Q08109 GPI10YGL142C 1851 nt3.58□□□□□ -1.84
HRD1Q08109 THI13YDL244W 1023 nt3.57□□□□□ -1.84
HRD1Q08109 UBP6YFR010W 1500 nt3.57□□□□□ -1.84
HRD1Q08109 GON7YJL184W 372 nt3.57□□□□□ -1.84
HRD1Q08109 THI11YJR156C 1023 nt3.57□□□□□ -1.84
HRD1Q08109 DBR1YKL149C 1218 nt3.57□□□□□ -1.84
HRD1Q08109 IOC2YLR095C 2439 nt3.57□□□□□ -1.84
HRD1Q08109 YLR407WYLR407W 687 nt3.57□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms