Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 DUX4L23-201ENST00000615195 1269 ntBASIC17.66■□□□□ 0.42
CCL20P78556 DUX4L24-201ENST00000617576 1269 ntBASIC17.66■□□□□ 0.42
CCL20P78556 DUX4L22-201ENST00000618238 1269 ntBASIC17.66■□□□□ 0.42
CCL20P78556 DUX4L20-201ENST00000619712 1269 ntBASIC17.66■□□□□ 0.42
CCL20P78556 DUX4L21-201ENST00000622058 1269 ntBASIC17.66■□□□□ 0.42
CCL20P78556 DUX4L10-201ENST00000622460 1267 ntBASIC17.66■□□□□ 0.42
CCL20P78556 DUX4L25-201ENST00000624915 1269 ntBASIC17.66■□□□□ 0.42
CCL20P78556 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL20P78556 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL20P78556 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL20P78556 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCL20P78556 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCL20P78556 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.66■□□□□ 0.42
CCL20P78556 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL20P78556 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL20P78556 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL20P78556 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCL20P78556 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCL20P78556 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL20P78556 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL20P78556 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL20P78556 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCL20P78556 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCL20P78556 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.65■□□□□ 0.42
CCL20P78556 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCL20P78556 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCL20P78556 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CCL20P78556 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCL20P78556 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCL20P78556 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL20P78556 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL20P78556 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL20P78556 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCL20P78556 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL20P78556 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC17.64■□□□□ 0.41
CCL20P78556 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.64■□□□□ 0.41
CCL20P78556 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL20P78556 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL20P78556 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL20P78556 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL20P78556 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCL20P78556 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCL20P78556 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL20P78556 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.63■□□□□ 0.41
CCL20P78556 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCL20P78556 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
CCL20P78556 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CCL20P78556 FAM99A-202ENST00000538190 1989 ntBASIC17.63■□□□□ 0.41
CCL20P78556 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL20P78556 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
CCL20P78556 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL20P78556 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL20P78556 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCL20P78556 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.63■□□□□ 0.41
CCL20P78556 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.63■□□□□ 0.41
CCL20P78556 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.63■□□□□ 0.41
CCL20P78556 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.63■□□□□ 0.41
CCL20P78556 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCL20P78556 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL20P78556 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL20P78556 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCL20P78556 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL20P78556 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL20P78556 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.62■□□□□ 0.41
CCL20P78556 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL20P78556 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.62■□□□□ 0.41
CCL20P78556 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCL20P78556 AC126177.7-201ENST00000547904 679 ntBASIC17.62■□□□□ 0.41
CCL20P78556 AC044849.2-201ENST00000606596 710 ntBASIC17.62■□□□□ 0.41
CCL20P78556 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CCL20P78556 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL20P78556 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL20P78556 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCL20P78556 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCL20P78556 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.61■□□□□ 0.41
CCL20P78556 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL20P78556 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCL20P78556 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL20P78556 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCL20P78556 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL20P78556 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL20P78556 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL20P78556 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL20P78556 AP006261.1-201ENST00000584783 668 ntBASIC17.61■□□□□ 0.41
CCL20P78556 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CCL20P78556 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL20P78556 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCL20P78556 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.61■□□□□ 0.41
CCL20P78556 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL20P78556 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.61■□□□□ 0.41
CCL20P78556 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL20P78556 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.61■□□□□ 0.41
CCL20P78556 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL20P78556 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCL20P78556 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL20P78556 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCL20P78556 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCL20P78556 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CCL20P78556 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.6■□□□□ 0.41
CCL20P78556 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms