Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TRA2BP62995 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRA2BP62995 LINC01529-204ENST00000636474 1715 ntBASIC21.18■□□□□ 0.98
TRA2BP62995 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRA2BP62995 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
TRA2BP62995 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRA2BP62995 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRA2BP62995 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.18■□□□□ 0.98
TRA2BP62995 GUSBP5-201ENST00000418136 578 ntBASIC21.18■□□□□ 0.98
TRA2BP62995 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.18■□□□□ 0.98
TRA2BP62995 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRA2BP62995 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.18■□□□□ 0.98
TRA2BP62995 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRA2BP62995 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.18■□□□□ 0.98
TRA2BP62995 AC009102.2-201ENST00000606772 1639 ntBASIC21.18■□□□□ 0.98
TRA2BP62995 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.18■□□□□ 0.98
TRA2BP62995 KRT16P3-201ENST00000439127 1283 ntBASIC21.17■□□□□ 0.98
TRA2BP62995 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.17■□□□□ 0.98
TRA2BP62995 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.17■□□□□ 0.98
TRA2BP62995 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TRA2BP62995 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRA2BP62995 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRA2BP62995 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRA2BP62995 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TRA2BP62995 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.17■□□□□ 0.98
TRA2BP62995 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRA2BP62995 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.16■□□□□ 0.98
TRA2BP62995 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRA2BP62995 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRA2BP62995 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TRA2BP62995 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.16■□□□□ 0.98
TRA2BP62995 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.16■□□□□ 0.98
TRA2BP62995 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRA2BP62995 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TRA2BP62995 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.16■□□□□ 0.98
TRA2BP62995 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRA2BP62995 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRA2BP62995 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRA2BP62995 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
TRA2BP62995 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TRA2BP62995 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.15■□□□□ 0.98
TRA2BP62995 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TRA2BP62995 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.15■□□□□ 0.98
TRA2BP62995 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.15■□□□□ 0.98
TRA2BP62995 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRA2BP62995 DUX4L4-201ENST00000566884 1269 ntBASIC21.15■□□□□ 0.98
TRA2BP62995 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRA2BP62995 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRA2BP62995 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRA2BP62995 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
TRA2BP62995 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
TRA2BP62995 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
TRA2BP62995 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.14■□□□□ 0.97
TRA2BP62995 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.14■□□□□ 0.97
TRA2BP62995 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.14■□□□□ 0.97
TRA2BP62995 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.13■□□□□ 0.97
TRA2BP62995 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TRA2BP62995 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRA2BP62995 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRA2BP62995 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.13■□□□□ 0.97
TRA2BP62995 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRA2BP62995 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TRA2BP62995 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TRA2BP62995 C17orf82-201ENST00000623772 1530 ntBASIC21.13■□□□□ 0.97
TRA2BP62995 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRA2BP62995 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRA2BP62995 C9orf163-202ENST00000624034 2573 ntBASIC21.12■□□□□ 0.97
TRA2BP62995 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.12■□□□□ 0.97
TRA2BP62995 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.12■□□□□ 0.97
TRA2BP62995 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.12■□□□□ 0.97
TRA2BP62995 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.12■□□□□ 0.97
TRA2BP62995 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TRA2BP62995 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
TRA2BP62995 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.12■□□□□ 0.97
TRA2BP62995 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRA2BP62995 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.11■□□□□ 0.97
TRA2BP62995 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.11■□□□□ 0.97
TRA2BP62995 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRA2BP62995 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.11■□□□□ 0.97
TRA2BP62995 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRA2BP62995 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRA2BP62995 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TRA2BP62995 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TRA2BP62995 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TRA2BP62995 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRA2BP62995 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRA2BP62995 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRA2BP62995 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRA2BP62995 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.1■□□□□ 0.97
TRA2BP62995 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.1■□□□□ 0.97
TRA2BP62995 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.1■□□□□ 0.97
TRA2BP62995 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.1■□□□□ 0.97
TRA2BP62995 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRA2BP62995 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRA2BP62995 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.09■□□□□ 0.97
TRA2BP62995 AC133561.1-201ENST00000568600 2415 ntBASIC21.09■□□□□ 0.97
TRA2BP62995 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRA2BP62995 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRA2BP62995 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRA2BP62995 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms