Protein–RNA interactions for Protein: P61006

RAB8A, Ras-related protein Rab-8A, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB8AP61006 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB8AP61006 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.37■■□□□ 1.01
RAB8AP61006 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB8AP61006 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RAB8AP61006 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB8AP61006 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.36■■□□□ 1.01
RAB8AP61006 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB8AP61006 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.36■■□□□ 1.01
RAB8AP61006 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.36■■□□□ 1.01
RAB8AP61006 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RAB8AP61006 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB8AP61006 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RAB8AP61006 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RAB8AP61006 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RAB8AP61006 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAB8AP61006 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAB8AP61006 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RAB8AP61006 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RAB8AP61006 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAB8AP61006 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.35■■□□□ 1.01
RAB8AP61006 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.35■■□□□ 1.01
RAB8AP61006 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RAB8AP61006 MIR4466-201ENST00000606121 54 ntBASIC21.35■■□□□ 1.01
RAB8AP61006 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAB8AP61006 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RAB8AP61006 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAB8AP61006 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.35■■□□□ 1.01
RAB8AP61006 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.35■■□□□ 1.01
RAB8AP61006 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB8AP61006 C17orf82-201ENST00000623772 1530 ntBASIC21.34■■□□□ 1.01
RAB8AP61006 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAB8AP61006 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB8AP61006 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.34■■□□□ 1.01
RAB8AP61006 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB8AP61006 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB8AP61006 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB8AP61006 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB8AP61006 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAB8AP61006 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.34■■□□□ 1.01
RAB8AP61006 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAB8AP61006 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.34■■□□□ 1.01
RAB8AP61006 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.34■■□□□ 1.01
RAB8AP61006 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB8AP61006 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB8AP61006 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB8AP61006 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.34■■□□□ 1.01
RAB8AP61006 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB8AP61006 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB8AP61006 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAB8AP61006 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
RAB8AP61006 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.33■■□□□ 1.01
RAB8AP61006 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAB8AP61006 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.33■■□□□ 1
RAB8AP61006 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.33■■□□□ 1
RAB8AP61006 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.33■■□□□ 1
RAB8AP61006 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAB8AP61006 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RAB8AP61006 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.32■■□□□ 1
RAB8AP61006 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
RAB8AP61006 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
RAB8AP61006 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.32■■□□□ 1
RAB8AP61006 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAB8AP61006 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
RAB8AP61006 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RAB8AP61006 AC144652.1-201ENST00000609974 1624 ntBASIC21.32■■□□□ 1
RAB8AP61006 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.32■■□□□ 1
RAB8AP61006 AC092068.2-201ENST00000590491 1708 ntBASIC21.32■■□□□ 1
RAB8AP61006 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB8AP61006 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RAB8AP61006 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB8AP61006 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
RAB8AP61006 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RAB8AP61006 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
RAB8AP61006 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.31■■□□□ 1
RAB8AP61006 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.31■■□□□ 1
RAB8AP61006 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.31■■□□□ 1
RAB8AP61006 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB8AP61006 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB8AP61006 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RAB8AP61006 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.31■■□□□ 1
RAB8AP61006 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB8AP61006 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAB8AP61006 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.3■■□□□ 1
RAB8AP61006 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAB8AP61006 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.3■■□□□ 1
RAB8AP61006 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAB8AP61006 SRD5A1P1-201ENST00000442297 786 ntBASIC21.3■■□□□ 1
RAB8AP61006 AC008406.3-201ENST00000620001 1374 ntBASIC21.3■■□□□ 1
RAB8AP61006 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB8AP61006 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB8AP61006 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAB8AP61006 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAB8AP61006 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RAB8AP61006 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.3■■□□□ 1
RAB8AP61006 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.3■■□□□ 1
RAB8AP61006 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB8AP61006 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
RAB8AP61006 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RAB8AP61006 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB8AP61006 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms