Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLCNKAP51800 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLCNKAP51800 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.97■■□□□ 1.11
CLCNKAP51800 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCNKAP51800 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLCNKAP51800 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCNKAP51800 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLCNKAP51800 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CLCNKAP51800 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.97■■□□□ 1.11
CLCNKAP51800 AC006455.2-201ENST00000429931 906 ntBASIC21.97■■□□□ 1.11
CLCNKAP51800 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCNKAP51800 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.97■■□□□ 1.11
CLCNKAP51800 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.97■■□□□ 1.11
CLCNKAP51800 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.97■■□□□ 1.11
CLCNKAP51800 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.97■■□□□ 1.11
CLCNKAP51800 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.97■■□□□ 1.11
CLCNKAP51800 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CLCNKAP51800 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLCNKAP51800 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLCNKAP51800 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CLCNKAP51800 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLCNKAP51800 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLCNKAP51800 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLCNKAP51800 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.96■■□□□ 1.11
CLCNKAP51800 DUX4L4-201ENST00000566884 1269 ntBASIC21.96■■□□□ 1.11
CLCNKAP51800 AL355001.2-201ENST00000620617 1191 ntBASIC21.96■■□□□ 1.11
CLCNKAP51800 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLCNKAP51800 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLCNKAP51800 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.96■■□□□ 1.11
CLCNKAP51800 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CLCNKAP51800 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCNKAP51800 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCNKAP51800 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLCNKAP51800 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.95■■□□□ 1.1
CLCNKAP51800 SUDS3P1-201ENST00000505831 966 ntBASIC21.95■■□□□ 1.1
CLCNKAP51800 MIR3181-201ENST00000578512 73 ntBASIC21.95■■□□□ 1.1
CLCNKAP51800 AC136469.2-201ENST00000623944 1028 ntBASIC21.95■■□□□ 1.1
CLCNKAP51800 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCNKAP51800 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CLCNKAP51800 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.95■■□□□ 1.1
CLCNKAP51800 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.95■■□□□ 1.1
CLCNKAP51800 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCNKAP51800 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CLCNKAP51800 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLCNKAP51800 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
CLCNKAP51800 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLCNKAP51800 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLCNKAP51800 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLCNKAP51800 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.94■■□□□ 1.1
CLCNKAP51800 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.94■■□□□ 1.1
CLCNKAP51800 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
CLCNKAP51800 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.94■■□□□ 1.1
CLCNKAP51800 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
CLCNKAP51800 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLCNKAP51800 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CLCNKAP51800 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.94■■□□□ 1.1
CLCNKAP51800 AC144652.1-201ENST00000609974 1624 ntBASIC21.94■■□□□ 1.1
CLCNKAP51800 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.94■■□□□ 1.1
CLCNKAP51800 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLCNKAP51800 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CLCNKAP51800 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLCNKAP51800 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLCNKAP51800 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.93■■□□□ 1.1
CLCNKAP51800 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLCNKAP51800 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CLCNKAP51800 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
CLCNKAP51800 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLCNKAP51800 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CLCNKAP51800 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.93■■□□□ 1.1
CLCNKAP51800 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CLCNKAP51800 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.93■■□□□ 1.1
CLCNKAP51800 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCNKAP51800 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CLCNKAP51800 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCNKAP51800 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLCNKAP51800 MIR4767-201ENST00000582827 78 ntBASIC21.92■■□□□ 1.1
CLCNKAP51800 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.92■■□□□ 1.1
CLCNKAP51800 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCNKAP51800 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLCNKAP51800 AL499627.2-201ENST00000606283 725 ntBASIC21.91■■□□□ 1.1
CLCNKAP51800 pRNA.6-201ENST00000610482 90 ntBASIC21.91■■□□□ 1.1
CLCNKAP51800 pRNA.5-201ENST00000612139 90 ntBASIC21.91■■□□□ 1.1
CLCNKAP51800 pRNA.11-201ENST00000618423 90 ntBASIC21.91■■□□□ 1.1
CLCNKAP51800 pRNA.13-201ENST00000619112 90 ntBASIC21.91■■□□□ 1.1
CLCNKAP51800 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCNKAP51800 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLCNKAP51800 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCNKAP51800 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCNKAP51800 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLCNKAP51800 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCNKAP51800 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCNKAP51800 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCNKAP51800 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLCNKAP51800 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.9■■□□□ 1.1
CLCNKAP51800 AC142381.2-201ENST00000566120 298 ntBASIC21.9■■□□□ 1.1
CLCNKAP51800 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CLCNKAP51800 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.9■■□□□ 1.1
CLCNKAP51800 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CLCNKAP51800 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCNKAP51800 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms