Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.68■□□□□ 0.74
HCFC1P51610 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.68■□□□□ 0.74
HCFC1P51610 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HCFC1P51610 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HCFC1P51610 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HCFC1P51610 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.68■□□□□ 0.74
HCFC1P51610 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1P51610 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.67■□□□□ 0.74
HCFC1P51610 AC004911.1-201ENST00000416316 871 ntBASIC19.67■□□□□ 0.74
HCFC1P51610 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HCFC1P51610 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HCFC1P51610 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.67■□□□□ 0.74
HCFC1P51610 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1P51610 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HCFC1P51610 ID1-201ENST00000376105 1233 ntBASIC19.66■□□□□ 0.74
HCFC1P51610 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC1P51610 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.66■□□□□ 0.74
HCFC1P51610 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC1P51610 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
HCFC1P51610 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.66■□□□□ 0.74
HCFC1P51610 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC1P51610 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC1P51610 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC1P51610 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC1P51610 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.66■□□□□ 0.74
HCFC1P51610 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC1P51610 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HCFC1P51610 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC1P51610 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC1P51610 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.65■□□□□ 0.74
HCFC1P51610 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HCFC1P51610 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.65■□□□□ 0.74
HCFC1P51610 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.64■□□□□ 0.74
HCFC1P51610 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.64■□□□□ 0.74
HCFC1P51610 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.64■□□□□ 0.74
HCFC1P51610 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HCFC1P51610 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
HCFC1P51610 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
HCFC1P51610 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.64■□□□□ 0.73
HCFC1P51610 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HCFC1P51610 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.64■□□□□ 0.73
HCFC1P51610 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.64■□□□□ 0.73
HCFC1P51610 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HCFC1P51610 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.64■□□□□ 0.73
HCFC1P51610 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HCFC1P51610 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.64■□□□□ 0.73
HCFC1P51610 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.64■□□□□ 0.73
HCFC1P51610 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HCFC1P51610 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
HCFC1P51610 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HCFC1P51610 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HCFC1P51610 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
HCFC1P51610 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HCFC1P51610 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HCFC1P51610 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HCFC1P51610 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HCFC1P51610 TERF1P2-201ENST00000583350 1212 ntBASIC19.63■□□□□ 0.73
HCFC1P51610 MIR6084-201ENST00000622012 110 ntBASIC19.63■□□□□ 0.73
HCFC1P51610 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HCFC1P51610 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HCFC1P51610 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
HCFC1P51610 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.63■□□□□ 0.73
HCFC1P51610 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HCFC1P51610 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HCFC1P51610 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.63■□□□□ 0.73
HCFC1P51610 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.63■□□□□ 0.73
HCFC1P51610 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.63■□□□□ 0.73
HCFC1P51610 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HCFC1P51610 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.62■□□□□ 0.73
HCFC1P51610 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.62■□□□□ 0.73
HCFC1P51610 AC141586.4-201ENST00000624558 1573 ntBASIC19.62■□□□□ 0.73
HCFC1P51610 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HCFC1P51610 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HCFC1P51610 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.62■□□□□ 0.73
HCFC1P51610 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HCFC1P51610 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HCFC1P51610 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HCFC1P51610 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HCFC1P51610 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.62■□□□□ 0.73
HCFC1P51610 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HCFC1P51610 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HCFC1P51610 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HCFC1P51610 AL161729.1-201ENST00000604104 1402 ntBASIC19.62■□□□□ 0.73
HCFC1P51610 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HCFC1P51610 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1P51610 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
HCFC1P51610 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.61■□□□□ 0.73
HCFC1P51610 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1P51610 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.61■□□□□ 0.73
HCFC1P51610 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
HCFC1P51610 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1P51610 ALDH1A3-203ENST00000557963 1670 ntBASIC19.61■□□□□ 0.73
HCFC1P51610 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1P51610 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.61■□□□□ 0.73
HCFC1P51610 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1P51610 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1P51610 AC133637.1-201ENST00000624115 1537 ntBASIC19.61■□□□□ 0.73
HCFC1P51610 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1P51610 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HCFC1P51610 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms