Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CPT1AP50416 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.07■■□□□ 1.6
CPT1AP50416 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CPT1AP50416 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.06■■□□□ 1.6
CPT1AP50416 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
CPT1AP50416 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.06■■□□□ 1.6
CPT1AP50416 DUX4L2-201ENST00000561772 1275 ntBASIC25.06■■□□□ 1.6
CPT1AP50416 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.06■■□□□ 1.6
CPT1AP50416 AC022517.1-201ENST00000592429 346 ntBASIC25.06■■□□□ 1.6
CPT1AP50416 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.06■■□□□ 1.6
CPT1AP50416 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.06■■□□□ 1.6
CPT1AP50416 DUX4L6-201ENST00000626483 1275 ntBASIC25.06■■□□□ 1.6
CPT1AP50416 DUX4L1-201ENST00000627662 1275 ntBASIC25.06■■□□□ 1.6
CPT1AP50416 DUX4L8-201ENST00000629013 1275 ntBASIC25.06■■□□□ 1.6
CPT1AP50416 DUX4L3-201ENST00000630187 1275 ntBASIC25.06■■□□□ 1.6
CPT1AP50416 DUX4L7-201ENST00000630678 1275 ntBASIC25.06■■□□□ 1.6
CPT1AP50416 DUX4L5-201ENST00000630834 1275 ntBASIC25.06■■□□□ 1.6
CPT1AP50416 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.06■■□□□ 1.6
CPT1AP50416 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
CPT1AP50416 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CPT1AP50416 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.06■■□□□ 1.6
CPT1AP50416 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CPT1AP50416 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.06■■□□□ 1.6
CPT1AP50416 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CPT1AP50416 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CPT1AP50416 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CPT1AP50416 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
CPT1AP50416 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.05■■□□□ 1.6
CPT1AP50416 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.05■■□□□ 1.6
CPT1AP50416 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CPT1AP50416 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CPT1AP50416 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CPT1AP50416 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CPT1AP50416 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.04■■□□□ 1.6
CPT1AP50416 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
CPT1AP50416 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.04■■□□□ 1.6
CPT1AP50416 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CPT1AP50416 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CPT1AP50416 MIR6084-201ENST00000622012 110 ntBASIC25.04■■□□□ 1.6
CPT1AP50416 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.04■■□□□ 1.6
CPT1AP50416 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.03■■□□□ 1.6
CPT1AP50416 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CPT1AP50416 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CPT1AP50416 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.03■■□□□ 1.6
CPT1AP50416 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CPT1AP50416 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.03■■□□□ 1.6
CPT1AP50416 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.03■■□□□ 1.6
CPT1AP50416 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CPT1AP50416 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.03■■□□□ 1.6
CPT1AP50416 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.03■■□□□ 1.6
CPT1AP50416 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CPT1AP50416 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
CPT1AP50416 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.03■■□□□ 1.6
CPT1AP50416 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CPT1AP50416 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CPT1AP50416 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.02■■□□□ 1.6
CPT1AP50416 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.02■■□□□ 1.6
CPT1AP50416 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.02■■□□□ 1.6
CPT1AP50416 AC010525.1-201ENST00000585559 441 ntBASIC25.02■■□□□ 1.6
CPT1AP50416 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.02■■□□□ 1.6
CPT1AP50416 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CPT1AP50416 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CPT1AP50416 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.02■■□□□ 1.6
CPT1AP50416 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CPT1AP50416 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CPT1AP50416 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.01■■□□□ 1.59
CPT1AP50416 AL137784.2-201ENST00000607332 1000 ntBASIC25.01■■□□□ 1.59
CPT1AP50416 IKBKGP1-201ENST00000612193 1073 ntBASIC25.01■■□□□ 1.59
CPT1AP50416 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CPT1AP50416 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CPT1AP50416 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
CPT1AP50416 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
CPT1AP50416 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CPT1AP50416 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CPT1AP50416 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CPT1AP50416 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25■■□□□ 1.59
CPT1AP50416 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25■■□□□ 1.59
CPT1AP50416 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25■■□□□ 1.59
CPT1AP50416 RARRES2P11-201ENST00000635158 484 ntBASIC25■■□□□ 1.59
CPT1AP50416 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CPT1AP50416 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25■■□□□ 1.59
CPT1AP50416 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25■■□□□ 1.59
CPT1AP50416 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25■■□□□ 1.59
CPT1AP50416 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CPT1AP50416 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25■■□□□ 1.59
CPT1AP50416 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25■■□□□ 1.59
CPT1AP50416 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CPT1AP50416 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
CPT1AP50416 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.99■■□□□ 1.59
CPT1AP50416 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
CPT1AP50416 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
CPT1AP50416 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.99■■□□□ 1.59
CPT1AP50416 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CPT1AP50416 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CPT1AP50416 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.99■■□□□ 1.59
CPT1AP50416 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
CPT1AP50416 AC144652.1-201ENST00000609974 1624 ntBASIC24.99■■□□□ 1.59
CPT1AP50416 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CPT1AP50416 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CPT1AP50416 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms