Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.21■□□□□ 0.99
PRIM2P49643 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRIM2P49643 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
PRIM2P49643 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
PRIM2P49643 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRIM2P49643 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRIM2P49643 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRIM2P49643 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRIM2P49643 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRIM2P49643 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PRIM2P49643 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRIM2P49643 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRIM2P49643 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.19■□□□□ 0.98
PRIM2P49643 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.19■□□□□ 0.98
PRIM2P49643 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRIM2P49643 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRIM2P49643 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRIM2P49643 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRIM2P49643 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.19■□□□□ 0.98
PRIM2P49643 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.19■□□□□ 0.98
PRIM2P49643 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.19■□□□□ 0.98
PRIM2P49643 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.19■□□□□ 0.98
PRIM2P49643 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.19■□□□□ 0.98
PRIM2P49643 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.19■□□□□ 0.98
PRIM2P49643 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PRIM2P49643 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PRIM2P49643 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRIM2P49643 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRIM2P49643 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRIM2P49643 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRIM2P49643 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRIM2P49643 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PRIM2P49643 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.18■□□□□ 0.98
PRIM2P49643 SNX5-217ENST00000606557 1087 ntBASIC21.18■□□□□ 0.98
PRIM2P49643 AC233723.2-201ENST00000623798 2106 ntBASIC21.18■□□□□ 0.98
PRIM2P49643 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRIM2P49643 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRIM2P49643 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.18■□□□□ 0.98
PRIM2P49643 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRIM2P49643 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRIM2P49643 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRIM2P49643 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRIM2P49643 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRIM2P49643 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
PRIM2P49643 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRIM2P49643 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRIM2P49643 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRIM2P49643 AL117328.2-201ENST00000624617 1940 ntBASIC21.16■□□□□ 0.98
PRIM2P49643 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.16■□□□□ 0.98
PRIM2P49643 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.16■□□□□ 0.98
PRIM2P49643 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PRIM2P49643 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRIM2P49643 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRIM2P49643 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PRIM2P49643 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.16■□□□□ 0.98
PRIM2P49643 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.16■□□□□ 0.98
PRIM2P49643 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRIM2P49643 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.16■□□□□ 0.98
PRIM2P49643 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRIM2P49643 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRIM2P49643 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRIM2P49643 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRIM2P49643 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.15■□□□□ 0.98
PRIM2P49643 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRIM2P49643 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRIM2P49643 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRIM2P49643 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRIM2P49643 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
PRIM2P49643 AC021242.3-201ENST00000607598 1377 ntBASIC21.15■□□□□ 0.98
PRIM2P49643 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PRIM2P49643 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.15■□□□□ 0.98
PRIM2P49643 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.15■□□□□ 0.98
PRIM2P49643 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRIM2P49643 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PRIM2P49643 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.15■□□□□ 0.98
PRIM2P49643 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRIM2P49643 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.15■□□□□ 0.98
PRIM2P49643 C1orf229-201ENST00000623686 2258 ntBASIC21.15■□□□□ 0.98
PRIM2P49643 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.14■□□□□ 0.98
PRIM2P49643 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.14■□□□□ 0.98
PRIM2P49643 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRIM2P49643 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRIM2P49643 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRIM2P49643 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.98
PRIM2P49643 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
PRIM2P49643 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PRIM2P49643 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
PRIM2P49643 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRIM2P49643 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PRIM2P49643 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRIM2P49643 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRIM2P49643 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRIM2P49643 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRIM2P49643 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.13■□□□□ 0.97
PRIM2P49643 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.13■□□□□ 0.97
PRIM2P49643 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRIM2P49643 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRIM2P49643 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRIM2P49643 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.13■□□□□ 0.97
PRIM2P49643 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms