Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CX3CR1P49238 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CX3CR1P49238 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CX3CR1P49238 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.62■□□□□ 0.73
CX3CR1P49238 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CX3CR1P49238 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CX3CR1P49238 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CX3CR1P49238 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CX3CR1P49238 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CX3CR1P49238 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.62■□□□□ 0.73
CX3CR1P49238 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CX3CR1P49238 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CX3CR1P49238 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.62■□□□□ 0.73
CX3CR1P49238 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CX3CR1P49238 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CX3CR1P49238 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CX3CR1P49238 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.61■□□□□ 0.73
CX3CR1P49238 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CX3CR1P49238 AC021242.3-201ENST00000607598 1377 ntBASIC19.61■□□□□ 0.73
CX3CR1P49238 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CX3CR1P49238 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.61■□□□□ 0.73
CX3CR1P49238 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.61■□□□□ 0.73
CX3CR1P49238 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.61■□□□□ 0.73
CX3CR1P49238 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.61■□□□□ 0.73
CX3CR1P49238 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.61■□□□□ 0.73
CX3CR1P49238 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.61■□□□□ 0.73
CX3CR1P49238 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CX3CR1P49238 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.61■□□□□ 0.73
CX3CR1P49238 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CX3CR1P49238 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CX3CR1P49238 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CX3CR1P49238 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CX3CR1P49238 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CX3CR1P49238 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.6■□□□□ 0.73
CX3CR1P49238 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CX3CR1P49238 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CX3CR1P49238 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CX3CR1P49238 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CX3CR1P49238 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CX3CR1P49238 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CX3CR1P49238 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
CX3CR1P49238 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.6■□□□□ 0.73
CX3CR1P49238 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CX3CR1P49238 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CX3CR1P49238 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.6■□□□□ 0.73
CX3CR1P49238 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.6■□□□□ 0.73
CX3CR1P49238 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.6■□□□□ 0.73
CX3CR1P49238 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CX3CR1P49238 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.6■□□□□ 0.73
CX3CR1P49238 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.6■□□□□ 0.73
CX3CR1P49238 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CX3CR1P49238 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CX3CR1P49238 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CX3CR1P49238 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CX3CR1P49238 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CX3CR1P49238 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CX3CR1P49238 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CX3CR1P49238 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CX3CR1P49238 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CX3CR1P49238 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CX3CR1P49238 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CX3CR1P49238 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.59■□□□□ 0.73
CX3CR1P49238 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CX3CR1P49238 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CX3CR1P49238 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.59■□□□□ 0.73
CX3CR1P49238 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CX3CR1P49238 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CX3CR1P49238 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CX3CR1P49238 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CX3CR1P49238 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CX3CR1P49238 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CX3CR1P49238 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CX3CR1P49238 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CX3CR1P49238 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CX3CR1P49238 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.58■□□□□ 0.72
CX3CR1P49238 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.58■□□□□ 0.72
CX3CR1P49238 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CX3CR1P49238 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CX3CR1P49238 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CX3CR1P49238 C1orf229-201ENST00000623686 2258 ntBASIC19.58■□□□□ 0.72
CX3CR1P49238 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CX3CR1P49238 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.58■□□□□ 0.72
CX3CR1P49238 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CX3CR1P49238 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CX3CR1P49238 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CX3CR1P49238 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CX3CR1P49238 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CX3CR1P49238 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CX3CR1P49238 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CX3CR1P49238 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CX3CR1P49238 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CX3CR1P49238 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CX3CR1P49238 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.57■□□□□ 0.72
CX3CR1P49238 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CX3CR1P49238 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CX3CR1P49238 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.57■□□□□ 0.72
CX3CR1P49238 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CX3CR1P49238 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CX3CR1P49238 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CX3CR1P49238 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms