Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 LSO1YJR005C-A 282 nt3.93□□□□□ -1.78
LSM1P47017 YLR156WYLR156W 345 nt3.93□□□□□ -1.78
LSM1P47017 YLR157W-DYLR157W-D 213 nt3.93□□□□□ -1.78
LSM1P47017 YLR159WYLR159W 345 nt3.93□□□□□ -1.78
LSM1P47017 YLR161WYLR161W 345 nt3.93□□□□□ -1.78
LSM1P47017 YGP1YNL160W 1065 nt3.93□□□□□ -1.78
LSM1P47017 SUA7YPR086W 1038 nt3.93□□□□□ -1.78
LSM1P47017 VMA1YDL185W 3216 nt3.93□□□□□ -1.78
LSM1P47017 MTF1YMR228W 1026 nt3.92□□□□□ -1.78
LSM1P47017 GAL11YOL051W 3246 nt3.92□□□□□ -1.78
LSM1P47017 CBF5YLR175W 1452 nt3.92□□□□□ -1.78
LSM1P47017 COA3YJL062W-A 258 nt3.91□□□□□ -1.78
LSM1P47017 URE2YNL229C 1065 nt3.91□□□□□ -1.78
LSM1P47017 PTR2YKR093W 1806 nt3.91□□□□□ -1.78
LSM1P47017 PRP19YLL036C 1512 nt3.9□□□□□ -1.78
LSM1P47017 RIA1YNL163C 3333 nt3.9□□□□□ -1.78
LSM1P47017 FAR10YLR238W 1437 nt3.9□□□□□ -1.78
LSM1P47017 NTH1YDR001C 2256 nt3.9□□□□□ -1.79
LSM1P47017 HMLALPHA1YCL066W 528 nt3.9□□□□□ -1.79
LSM1P47017 MATALPHA1YCR040W 528 nt3.9□□□□□ -1.79
LSM1P47017 YGL132WYGL132W 336 nt3.9□□□□□ -1.79
LSM1P47017 BUD13YGL174W 801 nt3.9□□□□□ -1.79
LSM1P47017 COG1YGL223C 1254 nt3.9□□□□□ -1.79
LSM1P47017 ECM34YHL043W 513 nt3.9□□□□□ -1.79
LSM1P47017 MAD2YJL030W 591 nt3.9□□□□□ -1.79
LSM1P47017 YNL165WYNL165W 1221 nt3.9□□□□□ -1.79
LSM1P47017 PWR1PWR1 941 nt3.9□□□□□ -1.79
LSM1P47017 YBR219CYBR219C 384 nt3.9□□□□□ -1.79
LSM1P47017 APM4YOL062C 1476 nt3.9□□□□□ -1.79
LSM1P47017 SEO1YAL067C 1782 nt3.89□□□□□ -1.79
LSM1P47017 IML2YJL082W 2196 nt3.89□□□□□ -1.79
LSM1P47017 MTC1YJL123C 1437 nt3.89□□□□□ -1.79
LSM1P47017 LSB1YGR136W 726 nt3.89□□□□□ -1.79
LSM1P47017 IES3YLR052W 753 nt3.89□□□□□ -1.79
LSM1P47017 FRM2YCL026C-A 582 nt3.89□□□□□ -1.79
LSM1P47017 SSH1YBR283C 1473 nt3.89□□□□□ -1.79
LSM1P47017 TAF8YML114C 1533 nt3.89□□□□□ -1.79
LSM1P47017 IMD2YHR216W 1572 nt3.89□□□□□ -1.79
LSM1P47017 TUB2YFL037W 1374 nt3.89□□□□□ -1.79
LSM1P47017 ATG23YLR431C 1362 nt3.89□□□□□ -1.79
LSM1P47017 NUP42YDR192C 1293 nt3.88□□□□□ -1.79
LSM1P47017 EMP47YFL048C 1338 nt3.88□□□□□ -1.79
LSM1P47017 SPO73YER046W 432 nt3.87□□□□□ -1.79
LSM1P47017 LCP5YER127W 1074 nt3.87□□□□□ -1.79
LSM1P47017 TYW3YGL050W 822 nt3.87□□□□□ -1.79
LSM1P47017 ARO2YGL148W 1131 nt3.87□□□□□ -1.79
LSM1P47017 SOL4YGR248W 768 nt3.87□□□□□ -1.79
LSM1P47017 AIF1YNR074C 1137 nt3.87□□□□□ -1.79
LSM1P47017 YDC1YPL087W 954 nt3.87□□□□□ -1.79
LSM1P47017 ALG6YOR002W 1635 nt3.87□□□□□ -1.79
LSM1P47017 RNA14YMR061W 2034 nt3.87□□□□□ -1.79
LSM1P47017 MNL1YHR204W 2391 nt3.87□□□□□ -1.79
LSM1P47017 IDS2YJL146W 1410 nt3.87□□□□□ -1.79
LSM1P47017 POL12YBL035C 2118 nt3.86□□□□□ -1.79
LSM1P47017 IBA57YJR122W 1494 nt3.86□□□□□ -1.79
LSM1P47017 JHD2YJR119C 2187 nt3.86□□□□□ -1.79
LSM1P47017 KTR7YIL085C 1554 nt3.86□□□□□ -1.79
LSM1P47017 PHO13YDL236W 939 nt3.86□□□□□ -1.79
LSM1P47017 NSE1YLR007W 1011 nt3.86□□□□□ -1.79
LSM1P47017 snR37snR37 386 nt3.86□□□□□ -1.79
LSM1P47017 YBR196C-BYBR196C-B 105 nt3.86□□□□□ -1.79
LSM1P47017 SRB6YBR253W 366 nt3.86□□□□□ -1.79
LSM1P47017 REI1YBR267W 1182 nt3.86□□□□□ -1.79
LSM1P47017 SWI3YJL176C 2478 nt3.85□□□□□ -1.79
LSM1P47017 OCA4YCR095C 1089 nt3.85□□□□□ -1.79
LSM1P47017 YDL094CYDL094C 510 nt3.85□□□□□ -1.79
LSM1P47017 YJR112W-AYJR112W-A 330 nt3.85□□□□□ -1.79
LSM1P47017 YOR200WYOR200W 399 nt3.85□□□□□ -1.79
LSM1P47017 YPL191CYPL191C 1083 nt3.85□□□□□ -1.79
LSM1P47017 TIF5YPR041W 1218 nt3.85□□□□□ -1.79
LSM1P47017 PBN1YCL052C 1251 nt3.85□□□□□ -1.79
LSM1P47017 GPI10YGL142C 1851 nt3.85□□□□□ -1.79
LSM1P47017 RTC1YOL138C 4026 nt3.85□□□□□ -1.79
LSM1P47017 BUD5YCR038C 1929 nt3.85□□□□□ -1.79
LSM1P47017 YDL109CYDL109C 1944 nt3.85□□□□□ -1.79
LSM1P47017 TPA1YER049W 1935 nt3.85□□□□□ -1.79
LSM1P47017 DRN1YGR093W 1524 nt3.85□□□□□ -1.79
LSM1P47017 IOC2YLR095C 2439 nt3.84□□□□□ -1.79
LSM1P47017 THI13YDL244W 1023 nt3.84□□□□□ -1.79
LSM1P47017 COX2Q0250 756 nt3.84□□□□□ -1.79
LSM1P47017 LNP1YHR192W 837 nt3.84□□□□□ -1.79
LSM1P47017 YIL163CYIL163C 354 nt3.84□□□□□ -1.79
LSM1P47017 THI11YJR156C 1023 nt3.84□□□□□ -1.79
LSM1P47017 ALR2YFL050C 2577 nt3.84□□□□□ -1.8
LSM1P47017 RAD54YGL163C 2697 nt3.84□□□□□ -1.8
LSM1P47017 BUD8YLR353W 1812 nt3.84□□□□□ -1.8
LSM1P47017 PTR3YFR029W 2037 nt3.83□□□□□ -1.8
LSM1P47017 YPR003CYPR003C 2265 nt3.83□□□□□ -1.8
LSM1P47017 ARP10YDR106W 855 nt3.83□□□□□ -1.8
LSM1P47017 DON1YDR273W 1098 nt3.83□□□□□ -1.8
LSM1P47017 PEX22YAL055W 543 nt3.83□□□□□ -1.8
LSM1P47017 RPS1BYML063W 768 nt3.83□□□□□ -1.8
LSM1P47017 BIK1YCL029C 1323 nt3.83□□□□□ -1.8
LSM1P47017 OMS1YDR316W 1416 nt3.83□□□□□ -1.8
LSM1P47017 SRS2YJL092W 3525 nt3.83□□□□□ -1.8
LSM1P47017 MCD4YKL165C 2760 nt3.82□□□□□ -1.8
LSM1P47017 RIM4YHL024W 2142 nt3.82□□□□□ -1.8
LSM1P47017 ABP140YOR239W 1887 nt3.82□□□□□ -1.8
LSM1P47017 YTM1YOR272W 1383 nt3.82□□□□□ -1.8
LSM1P47017 tS(AGA)D3tS(AGA)D3 83 nt3.82□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 39.5 ms