Protein–RNA interactions for Protein: P38210

LDB7, Chromatin structure-remodeling complex protein RSC14, yeastyeast

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB7P38210 RPN5YDL147W 1338 nt4.22□□□□□ -1.73
LDB7P38210 STB3YDR169C 1542 nt4.22□□□□□ -1.73
LDB7P38210 OCA4YCR095C 1089 nt4.22□□□□□ -1.73
LDB7P38210 RFU1YLR073C 603 nt4.22□□□□□ -1.73
LDB7P38210 CDC42YLR229C 576 nt4.22□□□□□ -1.73
LDB7P38210 NOP13YNL175C 1212 nt4.22□□□□□ -1.73
LDB7P38210 YOL035CYOL035C 303 nt4.22□□□□□ -1.73
LDB7P38210 TGS1YPL157W 948 nt4.22□□□□□ -1.73
LDB7P38210 YCL021W-AYCL021W-A 378 nt4.22□□□□□ -1.73
LDB7P38210 VHC1YBR235W 3363 nt4.22□□□□□ -1.73
LDB7P38210 LAP3YNL239W 1365 nt4.22□□□□□ -1.73
LDB7P38210 KTR7YIL085C 1554 nt4.22□□□□□ -1.73
LDB7P38210 THS1YIL078W 2205 nt4.21□□□□□ -1.74
LDB7P38210 TAF10YDR167W 621 nt4.21□□□□□ -1.74
LDB7P38210 YDR274CYDR274C 372 nt4.21□□□□□ -1.74
LDB7P38210 YDR445CYDR445C 408 nt4.21□□□□□ -1.74
LDB7P38210 tQ(UUG)CtQ(UUG)C 72 nt4.21□□□□□ -1.74
LDB7P38210 tQ(UUG)D1tQ(UUG)D1 72 nt4.21□□□□□ -1.74
LDB7P38210 tQ(UUG)D2tQ(UUG)D2 72 nt4.21□□□□□ -1.74
LDB7P38210 tQ(UUG)D3tQ(UUG)D3 72 nt4.21□□□□□ -1.74
LDB7P38210 tQ(UUG)E1tQ(UUG)E1 72 nt4.21□□□□□ -1.74
LDB7P38210 tQ(UUG)HtQ(UUG)H 72 nt4.21□□□□□ -1.74
LDB7P38210 tQ(UUG)LtQ(UUG)L 72 nt4.21□□□□□ -1.74
LDB7P38210 FRT2YAL028W 1587 nt4.21□□□□□ -1.74
LDB7P38210 MOT2YER068W 1764 nt4.21□□□□□ -1.74
LDB7P38210 TYW1YPL207W 2433 nt4.2□□□□□ -1.74
LDB7P38210 LNP1YHR192W 837 nt4.2□□□□□ -1.74
LDB7P38210 YIL171WYIL171W 330 nt4.2□□□□□ -1.74
LDB7P38210 CYC1YJR048W 330 nt4.2□□□□□ -1.74
LDB7P38210 YLR157W-DYLR157W-D 213 nt4.2□□□□□ -1.74
LDB7P38210 ORM2YLR350W 651 nt4.2□□□□□ -1.74
LDB7P38210 YBL010CYBL010C 843 nt4.2□□□□□ -1.74
LDB7P38210 VPS68YOL129W 555 nt4.2□□□□□ -1.74
LDB7P38210 YBR196C-BYBR196C-B 105 nt4.2□□□□□ -1.74
LDB7P38210 MAD3YJL013C 1548 nt4.2□□□□□ -1.74
LDB7P38210 MCM2YBL023C 2607 nt4.2□□□□□ -1.74
LDB7P38210 MDM30YLR368W 1797 nt4.19□□□□□ -1.74
LDB7P38210 ADY3YDL239C 2373 nt4.19□□□□□ -1.74
LDB7P38210 CYM1YDR430C 2970 nt4.19□□□□□ -1.74
LDB7P38210 YDR056CYDR056C 618 nt4.19□□□□□ -1.74
LDB7P38210 API2YDR525W 330 nt4.19□□□□□ -1.74
LDB7P38210 RPL34AYER056C-A 366 nt4.19□□□□□ -1.74
LDB7P38210 YER134CYER134C 537 nt4.19□□□□□ -1.74
LDB7P38210 BNA6YFR047C 888 nt4.19□□□□□ -1.74
LDB7P38210 COX18YGR062C 951 nt4.19□□□□□ -1.74
LDB7P38210 YRA2YKL214C 612 nt4.19□□□□□ -1.74
LDB7P38210 YAR030CYAR030C 342 nt4.19□□□□□ -1.74
LDB7P38210 YML031C-AYML031C-A 336 nt4.19□□□□□ -1.74
LDB7P38210 YML119WYML119W 1074 nt4.19□□□□□ -1.74
LDB7P38210 TRM11YOL124C 1302 nt4.19□□□□□ -1.74
LDB7P38210 ISR1YPR106W 1332 nt4.19□□□□□ -1.74
LDB7P38210 RAD57YDR004W 1383 nt4.18□□□□□ -1.74
LDB7P38210 AI5_BETAQ0075 1065 nt4.18□□□□□ -1.74
LDB7P38210 YGR291CYGR291C 222 nt4.18□□□□□ -1.74
LDB7P38210 YJL215CYJL215C 360 nt4.18□□□□□ -1.74
LDB7P38210 RAD27YKL113C 1149 nt4.18□□□□□ -1.74
LDB7P38210 RPS0BYLR048W 759 nt4.18□□□□□ -1.74
LDB7P38210 YOR034C-AYOR034C-A 243 nt4.18□□□□□ -1.74
LDB7P38210 MFM1YPL060W 1242 nt4.18□□□□□ -1.74
LDB7P38210 YBR298C-AYBR298C-A 222 nt4.18□□□□□ -1.74
LDB7P38210 HOM3YER052C 1584 nt4.18□□□□□ -1.74
LDB7P38210 PEP5YMR231W 3090 nt4.18□□□□□ -1.74
LDB7P38210 GAS5YOL030W 1455 nt4.18□□□□□ -1.74
LDB7P38210 YCR023CYCR023C 1836 nt4.17□□□□□ -1.74
LDB7P38210 RPC53YDL150W 1269 nt4.17□□□□□ -1.74
LDB7P38210 EFB1YAL003W 621 nt4.17□□□□□ -1.74
LDB7P38210 MHO1YJR008W 1017 nt4.17□□□□□ -1.74
LDB7P38210 YLR036CYLR036C 612 nt4.17□□□□□ -1.74
LDB7P38210 TMN2YDR107C 2019 nt4.17□□□□□ -1.74
LDB7P38210 PSY4YBL046W 1326 nt4.17□□□□□ -1.74
LDB7P38210 THI7YLR237W 1797 nt4.17□□□□□ -1.74
LDB7P38210 KAP114YGL241W 3015 nt4.16□□□□□ -1.74
LDB7P38210 YGR266WYGR266W 2106 nt4.16□□□□□ -1.74
LDB7P38210 LAS1YKR063C 1509 nt4.16□□□□□ -1.74
LDB7P38210 MDM34YGL219C 1380 nt4.16□□□□□ -1.74
LDB7P38210 YDR261C-DYDR261C-D 4815 nt4.16□□□□□ -1.74
LDB7P38210 SKG1YKR100C 1068 nt4.16□□□□□ -1.74
LDB7P38210 YDC1YPL087W 954 nt4.16□□□□□ -1.74
LDB7P38210 MDR1YGR100W 2853 nt4.16□□□□□ -1.74
LDB7P38210 HOT1YMR172W 2160 nt4.16□□□□□ -1.74
LDB7P38210 POL12YBL035C 2118 nt4.15□□□□□ -1.74
LDB7P38210 FMP30YPL103C 1407 nt4.15□□□□□ -1.74
LDB7P38210 MNN11YJL183W 1269 nt4.15□□□□□ -1.75
LDB7P38210 RDN5-1RDN5-1 121 nt4.15□□□□□ -1.75
LDB7P38210 UIP3YAR027W 708 nt4.15□□□□□ -1.75
LDB7P38210 RDN5-6RDN5-6 121 nt4.15□□□□□ -1.75
LDB7P38210 AST1YBL069W 1290 nt4.15□□□□□ -1.75
LDB7P38210 SET6YPL165C 1122 nt4.15□□□□□ -1.75
LDB7P38210 MSK1YNL073W 1731 nt4.15□□□□□ -1.75
LDB7P38210 SAS10YDL153C 1833 nt4.14□□□□□ -1.75
LDB7P38210 EKI1YDR147W 1605 nt4.14□□□□□ -1.75
LDB7P38210 RPG1YBR079C 2895 nt4.14□□□□□ -1.75
LDB7P38210 UBC1YDR177W 648 nt4.14□□□□□ -1.75
LDB7P38210 YEL009C-AYEL009C-A 408 nt4.14□□□□□ -1.75
LDB7P38210 BUD25YER014C-A 462 nt4.14□□□□□ -1.75
LDB7P38210 PIC2YER053C 903 nt4.14□□□□□ -1.75
LDB7P38210 RPL24AYGL031C 468 nt4.14□□□□□ -1.75
LDB7P38210 YHL049CYHL049C 816 nt4.14□□□□□ -1.75
LDB7P38210 SAE3YHR079C-A 276 nt4.14□□□□□ -1.75
LDB7P38210 GRE3YHR104W 984 nt4.14□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 47.2 ms