Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AL031432.3-201ENST00000607698 485 ntBASIC21.26■□□□□ 0.99
MMP11P24347 AL355001.2-201ENST00000620617 1191 ntBASIC21.26■□□□□ 0.99
MMP11P24347 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.26■□□□□ 0.99
MMP11P24347 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP11P24347 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP11P24347 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP11P24347 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MMP11P24347 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
MMP11P24347 C17orf82-201ENST00000623772 1530 ntBASIC21.25■□□□□ 0.99
MMP11P24347 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP11P24347 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP11P24347 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.25■□□□□ 0.99
MMP11P24347 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
MMP11P24347 SUDS3P1-201ENST00000505831 966 ntBASIC21.25■□□□□ 0.99
MMP11P24347 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MMP11P24347 AC099791.2-201ENST00000605725 427 ntBASIC21.25■□□□□ 0.99
MMP11P24347 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
MMP11P24347 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MMP11P24347 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.24■□□□□ 0.99
MMP11P24347 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP11P24347 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
MMP11P24347 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.24■□□□□ 0.99
MMP11P24347 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.24■□□□□ 0.99
MMP11P24347 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
MMP11P24347 ALDH1A3-203ENST00000557963 1670 ntBASIC21.24■□□□□ 0.99
MMP11P24347 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP11P24347 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP11P24347 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MMP11P24347 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
MMP11P24347 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.23■□□□□ 0.99
MMP11P24347 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
MMP11P24347 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MMP11P24347 AC241377.3-202ENST00000626088 1088 ntBASIC21.23■□□□□ 0.99
MMP11P24347 AC241585.3-202ENST00000628937 1088 ntBASIC21.23■□□□□ 0.99
MMP11P24347 AC245100.8-202ENST00000629247 1058 ntBASIC21.23■□□□□ 0.99
MMP11P24347 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MMP11P24347 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.23■□□□□ 0.99
MMP11P24347 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MMP11P24347 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
MMP11P24347 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MMP11P24347 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
MMP11P24347 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MMP11P24347 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP11P24347 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP11P24347 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MMP11P24347 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.22■□□□□ 0.99
MMP11P24347 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
MMP11P24347 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP11P24347 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MMP11P24347 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.21■□□□□ 0.99
MMP11P24347 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MMP11P24347 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MMP11P24347 SERBP1P1-201ENST00000396021 1160 ntBASIC21.21■□□□□ 0.99
MMP11P24347 AL138724.1-201ENST00000606771 1088 ntBASIC21.21■□□□□ 0.99
MMP11P24347 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.21■□□□□ 0.99
MMP11P24347 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
MMP11P24347 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MMP11P24347 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP11P24347 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP11P24347 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.2■□□□□ 0.98
MMP11P24347 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MMP11P24347 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MMP11P24347 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP11P24347 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.2■□□□□ 0.98
MMP11P24347 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP11P24347 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MMP11P24347 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
MMP11P24347 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP11P24347 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
MMP11P24347 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
MMP11P24347 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP11P24347 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MMP11P24347 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
MMP11P24347 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP11P24347 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.19■□□□□ 0.98
MMP11P24347 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.19■□□□□ 0.98
MMP11P24347 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.19■□□□□ 0.98
MMP11P24347 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.19■□□□□ 0.98
MMP11P24347 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP11P24347 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP11P24347 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MMP11P24347 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MMP11P24347 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
MMP11P24347 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP11P24347 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MMP11P24347 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP11P24347 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MMP11P24347 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MMP11P24347 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.18■□□□□ 0.98
MMP11P24347 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.18■□□□□ 0.98
MMP11P24347 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP11P24347 AC011298.3-201ENST00000615796 283 ntBASIC21.18■□□□□ 0.98
MMP11P24347 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.18■□□□□ 0.98
MMP11P24347 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP11P24347 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP11P24347 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP11P24347 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.18■□□□□ 0.98
MMP11P24347 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MMP11P24347 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP11P24347 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms