Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 AL161729.1-201ENST00000604104 1402 ntBASIC20.27■□□□□ 0.84
CD53P19397 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD53P19397 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD53P19397 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.27■□□□□ 0.84
CD53P19397 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CD53P19397 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CD53P19397 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
CD53P19397 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.27■□□□□ 0.84
CD53P19397 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.27■□□□□ 0.84
CD53P19397 AL356740.2-201ENST00000601559 647 ntBASIC20.27■□□□□ 0.84
CD53P19397 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.27■□□□□ 0.84
CD53P19397 AC005837.3-201ENST00000612163 286 ntBASIC20.27■□□□□ 0.84
CD53P19397 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CD53P19397 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CD53P19397 AC127496.7-201ENST00000625110 1798 ntBASIC20.26■□□□□ 0.83
CD53P19397 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CD53P19397 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.26■□□□□ 0.83
CD53P19397 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.26■□□□□ 0.83
CD53P19397 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CD53P19397 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CD53P19397 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CD53P19397 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.26■□□□□ 0.83
CD53P19397 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD53P19397 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD53P19397 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD53P19397 AC096631.2-201ENST00000436136 790 ntBASIC20.25■□□□□ 0.83
CD53P19397 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.25■□□□□ 0.83
CD53P19397 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD53P19397 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CD53P19397 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CD53P19397 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
CD53P19397 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD53P19397 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD53P19397 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD53P19397 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.24■□□□□ 0.83
CD53P19397 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.24■□□□□ 0.83
CD53P19397 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD53P19397 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.24■□□□□ 0.83
CD53P19397 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.24■□□□□ 0.83
CD53P19397 MIR4466-201ENST00000606121 54 ntBASIC20.24■□□□□ 0.83
CD53P19397 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD53P19397 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD53P19397 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.24■□□□□ 0.83
CD53P19397 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD53P19397 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CD53P19397 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD53P19397 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.23■□□□□ 0.83
CD53P19397 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD53P19397 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CD53P19397 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.23■□□□□ 0.83
CD53P19397 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.23■□□□□ 0.83
CD53P19397 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.22■□□□□ 0.83
CD53P19397 LINC00526-201ENST00000581067 1875 ntBASIC20.22■□□□□ 0.83
CD53P19397 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD53P19397 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.22■□□□□ 0.83
CD53P19397 EP400NL-214ENST00000641289 2402 ntBASIC20.22■□□□□ 0.83
CD53P19397 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.22■□□□□ 0.83
CD53P19397 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.22■□□□□ 0.83
CD53P19397 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.22■□□□□ 0.83
CD53P19397 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.22■□□□□ 0.83
CD53P19397 AC011551.1-201ENST00000614101 683 ntBASIC20.22■□□□□ 0.83
CD53P19397 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD53P19397 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.22■□□□□ 0.83
CD53P19397 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CD53P19397 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD53P19397 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CD53P19397 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD53P19397 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CD53P19397 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD53P19397 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD53P19397 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD53P19397 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CD53P19397 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.21■□□□□ 0.83
CD53P19397 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD53P19397 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
CD53P19397 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.21■□□□□ 0.83
CD53P19397 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.21■□□□□ 0.83
CD53P19397 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD53P19397 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.21■□□□□ 0.83
CD53P19397 LINC00565-201ENST00000562710 2331 ntBASIC20.21■□□□□ 0.83
CD53P19397 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD53P19397 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CD53P19397 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
CD53P19397 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD53P19397 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CD53P19397 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
CD53P19397 AC133561.4-201ENST00000566112 224 ntBASIC20.2■□□□□ 0.82
CD53P19397 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.2■□□□□ 0.82
CD53P19397 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CD53P19397 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.2■□□□□ 0.82
CD53P19397 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.2■□□□□ 0.82
CD53P19397 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD53P19397 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CD53P19397 ECEL1P1-201ENST00000373592 1742 ntBASIC20.19■□□□□ 0.82
CD53P19397 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.19■□□□□ 0.82
CD53P19397 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CD53P19397 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CD53P19397 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CD53P19397 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD53P19397 AC137767.1-201ENST00000602918 1920 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms