Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.57■□□□□ 0.88
SMIM18P0DKX4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.56■□□□□ 0.88
SMIM18P0DKX4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM18P0DKX4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM18P0DKX4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.56■□□□□ 0.88
SMIM18P0DKX4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM18P0DKX4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM18P0DKX4 DUX4L28-201ENST00000623687 678 ntBASIC20.56■□□□□ 0.88
SMIM18P0DKX4 AC148477.6-201ENST00000623746 465 ntBASIC20.56■□□□□ 0.88
SMIM18P0DKX4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SMIM18P0DKX4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMIM18P0DKX4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
SMIM18P0DKX4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM18P0DKX4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM18P0DKX4 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.55■□□□□ 0.88
SMIM18P0DKX4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM18P0DKX4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM18P0DKX4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.55■□□□□ 0.88
SMIM18P0DKX4 AC097358.2-201ENST00000607541 1159 ntBASIC20.55■□□□□ 0.88
SMIM18P0DKX4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM18P0DKX4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM18P0DKX4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SMIM18P0DKX4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM18P0DKX4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMIM18P0DKX4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.54■□□□□ 0.88
SMIM18P0DKX4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SMIM18P0DKX4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM18P0DKX4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM18P0DKX4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM18P0DKX4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM18P0DKX4 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.54■□□□□ 0.88
SMIM18P0DKX4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM18P0DKX4 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.54■□□□□ 0.88
SMIM18P0DKX4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMIM18P0DKX4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.54■□□□□ 0.88
SMIM18P0DKX4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.53■□□□□ 0.88
SMIM18P0DKX4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SMIM18P0DKX4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.53■□□□□ 0.88
SMIM18P0DKX4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM18P0DKX4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMIM18P0DKX4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM18P0DKX4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM18P0DKX4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM18P0DKX4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SMIM18P0DKX4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMIM18P0DKX4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMIM18P0DKX4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM18P0DKX4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SMIM18P0DKX4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM18P0DKX4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM18P0DKX4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM18P0DKX4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM18P0DKX4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.51■□□□□ 0.87
SMIM18P0DKX4 SUZ12P1-203ENST00000578195 985 ntBASIC20.51■□□□□ 0.87
SMIM18P0DKX4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM18P0DKX4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.51■□□□□ 0.87
SMIM18P0DKX4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM18P0DKX4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMIM18P0DKX4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.51■□□□□ 0.87
SMIM18P0DKX4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.51■□□□□ 0.87
SMIM18P0DKX4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.51■□□□□ 0.87
SMIM18P0DKX4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM18P0DKX4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
SMIM18P0DKX4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM18P0DKX4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM18P0DKX4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM18P0DKX4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
SMIM18P0DKX4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM18P0DKX4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM18P0DKX4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM18P0DKX4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM18P0DKX4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM18P0DKX4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.5■□□□□ 0.87
SMIM18P0DKX4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMIM18P0DKX4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SMIM18P0DKX4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM18P0DKX4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM18P0DKX4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.49■□□□□ 0.87
SMIM18P0DKX4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM18P0DKX4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM18P0DKX4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SMIM18P0DKX4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.49■□□□□ 0.87
SMIM18P0DKX4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SMIM18P0DKX4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMIM18P0DKX4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.49■□□□□ 0.87
SMIM18P0DKX4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.49■□□□□ 0.87
SMIM18P0DKX4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SMIM18P0DKX4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
SMIM18P0DKX4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM18P0DKX4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM18P0DKX4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM18P0DKX4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM18P0DKX4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM18P0DKX4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM18P0DKX4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMIM18P0DKX4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SMIM18P0DKX4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.47■□□□□ 0.87
SMIM18P0DKX4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.47■□□□□ 0.87
SMIM18P0DKX4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMIM18P0DKX4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms