Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF728P0DKX0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.98■□□□□ 0.63
ZNF728P0DKX0 KRT125P-201ENST00000546827 989 ntBASIC18.98■□□□□ 0.63
ZNF728P0DKX0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF728P0DKX0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF728P0DKX0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF728P0DKX0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF728P0DKX0 C1orf229-201ENST00000623686 2258 ntBASIC18.98■□□□□ 0.63
ZNF728P0DKX0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ZNF728P0DKX0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF728P0DKX0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF728P0DKX0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF728P0DKX0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ZNF728P0DKX0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF728P0DKX0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF728P0DKX0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF728P0DKX0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF728P0DKX0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF728P0DKX0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF728P0DKX0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF728P0DKX0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF728P0DKX0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ZNF728P0DKX0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF728P0DKX0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.97■□□□□ 0.63
ZNF728P0DKX0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF728P0DKX0 AC131274.2-201ENST00000580697 1507 ntBASIC18.95■□□□□ 0.62
ZNF728P0DKX0 AC021242.3-201ENST00000607598 1377 ntBASIC18.95■□□□□ 0.62
ZNF728P0DKX0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF728P0DKX0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF728P0DKX0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF728P0DKX0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ZNF728P0DKX0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF728P0DKX0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF728P0DKX0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ZNF728P0DKX0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ZNF728P0DKX0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
ZNF728P0DKX0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF728P0DKX0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF728P0DKX0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF728P0DKX0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ZNF728P0DKX0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF728P0DKX0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF728P0DKX0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF728P0DKX0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF728P0DKX0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
ZNF728P0DKX0 LINC00565-201ENST00000562710 2331 ntBASIC18.94■□□□□ 0.62
ZNF728P0DKX0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ZNF728P0DKX0 AC239859.2-201ENST00000444165 318 ntBASIC18.94■□□□□ 0.62
ZNF728P0DKX0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.94■□□□□ 0.62
ZNF728P0DKX0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF728P0DKX0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.94■□□□□ 0.62
ZNF728P0DKX0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.94■□□□□ 0.62
ZNF728P0DKX0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.94■□□□□ 0.62
ZNF728P0DKX0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF728P0DKX0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF728P0DKX0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF728P0DKX0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF728P0DKX0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF728P0DKX0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF728P0DKX0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF728P0DKX0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF728P0DKX0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF728P0DKX0 AL035685.1-201ENST00000636663 812 ntBASIC18.93■□□□□ 0.62
ZNF728P0DKX0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF728P0DKX0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF728P0DKX0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF728P0DKX0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ZNF728P0DKX0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.93■□□□□ 0.62
ZNF728P0DKX0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF728P0DKX0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF728P0DKX0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF728P0DKX0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ZNF728P0DKX0 AC004448.1-201ENST00000458332 883 ntBASIC18.92■□□□□ 0.62
ZNF728P0DKX0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF728P0DKX0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF728P0DKX0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ZNF728P0DKX0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF728P0DKX0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms